Protein : Carub.0008s1332.1.p C. rubella v1.1
UniProt Accession:  ? R0GAH2 Secondary Identifier:  PAC:39252841
Organism Name:  Capsella rubella Length:  359  
Name:  Carub.0008s1332.1.p
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Proteins

4 Protein Domains

DB identifier Type Name
IPR029063 Domain S-adenosyl-L-methionine-dependent methyltransferase
IPR030374 Domain Polyamine biosynthesis domain
IPR030668 Family Spermidine/spermine synthase, eukaryotes
IPR001045 Family Spermidine/spermine synthases
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0008s1332.1_CDS 1080   scaffold_8: 7616985-7619236 Capsella rubella

25 Ontology Annotations

Ontology Term Db Gene/Protein Name
KOG1562 KOG Carub.0008s1332.1.p
SPERMIDINESYN-RXN MetaCyc Carub.0008s1332.1.p
IPR030668 InterPro Carub.0008s1332.1.p
K00797 KEGG Carub.0008s1332.1.p
IPR029063 InterPro Carub.0008s1332.1.p
IPR030374 InterPro Carub.0008s1332.1.p
GO:0006595 GO Carub.0008s1332.1.p
IPR001045 InterPro Carub.0008s1332.1.p
G3DSA:3.40.50.150 GENE3D Carub.0008s1332.1.p
GO:0003824 GO Carub.0008s1332.1.p
2.5.1.22 ENZYME Carub.0008s1332.1.p
G3DSA:2.30.140.10 GENE3D Carub.0008s1332.1.p
2.5.1.16 ENZYME Carub.0008s1332.1.p
R0GAH2 UniProt Carub.0008s1332.1.p
TIGR00417 TIGRFAMs Carub.0008s1332.1.p
PS51006 PROFILE Carub.0008s1332.1.p
SSF53335 SSF Carub.0008s1332.1.p
PF01564 PFAM Carub.0008s1332.1.p
PIRSF000502 PIRSF Carub.0008s1332.1.p
BSUBPOLYAMSYN-PWY Pathway Carub.0008s1332.1.p
PWY-7528 Pathway Carub.0008s1332.1.p
PTHR11558:SF25 PANTHER Carub.0008s1332.1.p
ARGSPECAT-PWY Pathway Carub.0008s1332.1.p
SPERMINE-SYNTHASE-RXN MetaCyc Carub.0008s1332.1.p
PTHR11558 PANTHER Carub.0008s1332.1.p

3 Pathway Components

Type Key Level Step
      8
      44
      8

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARGSPECAT-PWY Capsella rubella pathologic  
Crubella BSUBPOLYAMSYN-PWY Capsella rubella pathologic  
Crubella PWY-7528 Capsella rubella pathologic