Gene : Carub.0008s1341 C. rubella v1.1
Defline:  (1 of 1) PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Genomic Order:  1341
Name:  ? Carub.0008s1341 Secondary Identifier:  ? PAC:39252998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1341 0.5kb upstream 0.5kb upstream 2855 true scaffold_8: 7663175-7666029 Capsella rubella
Carub.0008s1341 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7665530-7666029 Capsella rubella
Carub.0008s1341 0.5kb downstream 0.5kb downstream 2855 true scaffold_8: 7662675-7665529 Capsella rubella
Carub.0008s1341 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7662675-7663174 Capsella rubella
Carub.0008s1341 1.0kb upstream 1.0kb upstream 3355 true scaffold_8: 7663175-7666529 Capsella rubella
Carub.0008s1341 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7665530-7666529 Capsella rubella
Carub.0008s1341 1.0kb downstream 1.0kb downstream 3355 true scaffold_8: 7662175-7665529 Capsella rubella
Carub.0008s1341 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7662175-7663174 Capsella rubella
Carub.0008s1341 2.0kb upstream 2.0kb upstream 4355 true scaffold_8: 7663175-7667529 Capsella rubella
Carub.0008s1341 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7665530-7667529 Capsella rubella
Carub.0008s1341 2.0kb downstream 2.0kb downstream 4355 true scaffold_8: 7661175-7665529 Capsella rubella
Carub.0008s1341 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7661175-7663174 Capsella rubella
Carub.0008s1341 5.0kb upstream 5.0kb upstream 7355 true scaffold_8: 7663175-7670529 Capsella rubella
Carub.0008s1341 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7665530-7670529 Capsella rubella
Carub.0008s1341 5.0kb downstream 5.0kb downstream 7355 true scaffold_8: 7658175-7665529 Capsella rubella
Carub.0008s1341 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7658175-7663174 Capsella rubella
Carub.0008s1341 10.0kb upstream 10.0kb upstream 12355 true scaffold_8: 7663175-7675529 Capsella rubella
Carub.0008s1341 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7665530-7675529 Capsella rubella
Carub.0008s1341 10.0kb downstream 10.0kb downstream 12355 true scaffold_8: 7653175-7665529 Capsella rubella
Carub.0008s1341 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7653175-7663174 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368479 5261 Brassicaceae View MSA
123840058 5264 Brassicales-Malvales View MSA
124343509 5266 SBM View MSA
124253997 5268 Malvidae View MSA
124060972 5270 Rosid View MSA
123746034 5271 Pentapetalae View MSA
122787503 5272 Eudicot View MSA
122042444 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain