Gene : Carub.0008s1353 C. rubella v1.1
Defline:  (1 of 1) PTHR11262//PTHR11262:SF11 - HSL AND CLP PROTEASE // ATP-DEPENDENT CLP PROTEASE REGULATORY SUBUNIT CLPX Genomic Order:  1353
Name:  ? Carub.0008s1353 Secondary Identifier:  ? PAC:39251046
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1353 0.5kb upstream 0.5kb upstream 4794 true scaffold_8: 7717406-7722199 Capsella rubella
Carub.0008s1353 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7717406-7717905 Capsella rubella
Carub.0008s1353 0.5kb downstream 0.5kb downstream 4794 true scaffold_8: 7717906-7722699 Capsella rubella
Carub.0008s1353 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7722200-7722699 Capsella rubella
Carub.0008s1353 1.0kb upstream 1.0kb upstream 5294 true scaffold_8: 7716906-7722199 Capsella rubella
Carub.0008s1353 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7716906-7717905 Capsella rubella
Carub.0008s1353 1.0kb downstream 1.0kb downstream 5294 true scaffold_8: 7717906-7723199 Capsella rubella
Carub.0008s1353 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7722200-7723199 Capsella rubella
Carub.0008s1353 2.0kb upstream 2.0kb upstream 6294 true scaffold_8: 7715906-7722199 Capsella rubella
Carub.0008s1353 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7715906-7717905 Capsella rubella
Carub.0008s1353 2.0kb downstream 2.0kb downstream 6294 true scaffold_8: 7717906-7724199 Capsella rubella
Carub.0008s1353 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7722200-7724199 Capsella rubella
Carub.0008s1353 5.0kb upstream 5.0kb upstream 9294 true scaffold_8: 7712906-7722199 Capsella rubella
Carub.0008s1353 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7712906-7717905 Capsella rubella
Carub.0008s1353 5.0kb downstream 5.0kb downstream 9294 true scaffold_8: 7717906-7727199 Capsella rubella
Carub.0008s1353 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7722200-7727199 Capsella rubella
Carub.0008s1353 10.0kb upstream 10.0kb upstream 14294 true scaffold_8: 7707906-7722199 Capsella rubella
Carub.0008s1353 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7707906-7717905 Capsella rubella
Carub.0008s1353 10.0kb downstream 10.0kb downstream 14294 true scaffold_8: 7717906-7732199 Capsella rubella
Carub.0008s1353 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7722200-7732199 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375064 5261 Brassicaceae View MSA
123828988 5264 Brassicales-Malvales View MSA
124342428 5266 SBM View MSA
124236866 5268 Malvidae View MSA
124065243 5270 Rosid View MSA
123749769 5271 Pentapetalae View MSA
122790976 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain