Gene : Carub.0008s1362 C. rubella v1.1
Defline:  (1 of 1) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  1362
Name:  ? Carub.0008s1362 Secondary Identifier:  ? PAC:39252729
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLUGLNSYN-PWY Capsella rubella pathologic  
Crubella PWY-3282 Capsella rubella pathologic  
Crubella PWY-6963 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1362 0.5kb upstream 0.5kb upstream 8570 true scaffold_8: 7779599-7788168 Capsella rubella
Carub.0008s1362 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7779599-7780098 Capsella rubella
Carub.0008s1362 0.5kb downstream 0.5kb downstream 8570 true scaffold_8: 7780099-7788668 Capsella rubella
Carub.0008s1362 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7788169-7788668 Capsella rubella
Carub.0008s1362 1.0kb upstream 1.0kb upstream 9070 true scaffold_8: 7779099-7788168 Capsella rubella
Carub.0008s1362 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7779099-7780098 Capsella rubella
Carub.0008s1362 1.0kb downstream 1.0kb downstream 9070 true scaffold_8: 7780099-7789168 Capsella rubella
Carub.0008s1362 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7788169-7789168 Capsella rubella
Carub.0008s1362 2.0kb upstream 2.0kb upstream 10070 true scaffold_8: 7778099-7788168 Capsella rubella
Carub.0008s1362 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7778099-7780098 Capsella rubella
Carub.0008s1362 2.0kb downstream 2.0kb downstream 10070 true scaffold_8: 7780099-7790168 Capsella rubella
Carub.0008s1362 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7788169-7790168 Capsella rubella
Carub.0008s1362 5.0kb upstream 5.0kb upstream 13070 true scaffold_8: 7775099-7788168 Capsella rubella
Carub.0008s1362 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7775099-7780098 Capsella rubella
Carub.0008s1362 5.0kb downstream 5.0kb downstream 13070 true scaffold_8: 7780099-7793168 Capsella rubella
Carub.0008s1362 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7788169-7793168 Capsella rubella
Carub.0008s1362 10.0kb upstream 10.0kb upstream 18070 true scaffold_8: 7770099-7788168 Capsella rubella
Carub.0008s1362 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7770099-7780098 Capsella rubella
Carub.0008s1362 10.0kb downstream 10.0kb downstream 18070 true scaffold_8: 7780099-7798168 Capsella rubella
Carub.0008s1362 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7788169-7798168 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366728 5261 Brassicaceae View MSA
123832225 5264 Brassicales-Malvales View MSA
124341222 5266 SBM View MSA
124241008 5268 Malvidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain