Gene : Carub.0006s0748 C. rubella v1.1
Defline:  (1 of 1) K03942 - NADH dehydrogenase (ubiquinone) flavoprotein 1 (NDUFV1) Genomic Order:  748
Name:  ? Carub.0006s0748 Secondary Identifier:  ? PAC:39249312
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3781 Capsella rubella pathologic  
Crubella PWY-4302 Capsella rubella pathologic  
Crubella PWY-5083 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0748 0.5kb upstream 0.5kb upstream 3036 true scaffold_6: 2752710-2755745 Capsella rubella
Carub.0006s0748 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2755246-2755745 Capsella rubella
Carub.0006s0748 0.5kb downstream 0.5kb downstream 3036 true scaffold_6: 2752210-2755245 Capsella rubella
Carub.0006s0748 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2752210-2752709 Capsella rubella
Carub.0006s0748 1.0kb upstream 1.0kb upstream 3536 true scaffold_6: 2752710-2756245 Capsella rubella
Carub.0006s0748 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2755246-2756245 Capsella rubella
Carub.0006s0748 1.0kb downstream 1.0kb downstream 3536 true scaffold_6: 2751710-2755245 Capsella rubella
Carub.0006s0748 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2751710-2752709 Capsella rubella
Carub.0006s0748 2.0kb upstream 2.0kb upstream 4536 true scaffold_6: 2752710-2757245 Capsella rubella
Carub.0006s0748 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2755246-2757245 Capsella rubella
Carub.0006s0748 2.0kb downstream 2.0kb downstream 4536 true scaffold_6: 2750710-2755245 Capsella rubella
Carub.0006s0748 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2750710-2752709 Capsella rubella
Carub.0006s0748 5.0kb upstream 5.0kb upstream 7536 true scaffold_6: 2752710-2760245 Capsella rubella
Carub.0006s0748 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2755246-2760245 Capsella rubella
Carub.0006s0748 5.0kb downstream 5.0kb downstream 7536 true scaffold_6: 2747710-2755245 Capsella rubella
Carub.0006s0748 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2747710-2752709 Capsella rubella
Carub.0006s0748 10.0kb upstream 10.0kb upstream 12536 true scaffold_6: 2752710-2765245 Capsella rubella
Carub.0006s0748 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2755246-2765245 Capsella rubella
Carub.0006s0748 10.0kb downstream 10.0kb downstream 12536 true scaffold_6: 2742710-2755245 Capsella rubella
Carub.0006s0748 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2742710-2752709 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374556 5261 Brassicaceae View MSA
123833710 5264 Brassicales-Malvales View MSA
124340714 5266 SBM View MSA
124237168 5268 Malvidae View MSA
124064570 5270 Rosid View MSA
123748716 5271 Pentapetalae View MSA
122786089 5272 Eudicot View MSA
122048540 5273 Angiosperm View MSA
121346586 5274 Embryophyte View MSA
123424028 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain