Gene : Carub.0008s1505 C. rubella v1.1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1505
Name:  ? Carub.0008s1505 Secondary Identifier:  ? PAC:39251328
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1505 0.5kb upstream 0.5kb upstream 3965 true scaffold_8: 8337486-8341450 Capsella rubella
Carub.0008s1505 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8340951-8341450 Capsella rubella
Carub.0008s1505 0.5kb downstream 0.5kb downstream 3965 true scaffold_8: 8336986-8340950 Capsella rubella
Carub.0008s1505 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8336986-8337485 Capsella rubella
Carub.0008s1505 1.0kb upstream 1.0kb upstream 4465 true scaffold_8: 8337486-8341950 Capsella rubella
Carub.0008s1505 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8340951-8341950 Capsella rubella
Carub.0008s1505 1.0kb downstream 1.0kb downstream 4465 true scaffold_8: 8336486-8340950 Capsella rubella
Carub.0008s1505 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8336486-8337485 Capsella rubella
Carub.0008s1505 2.0kb upstream 2.0kb upstream 5465 true scaffold_8: 8337486-8342950 Capsella rubella
Carub.0008s1505 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8340951-8342950 Capsella rubella
Carub.0008s1505 2.0kb downstream 2.0kb downstream 5465 true scaffold_8: 8335486-8340950 Capsella rubella
Carub.0008s1505 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8335486-8337485 Capsella rubella
Carub.0008s1505 5.0kb upstream 5.0kb upstream 8465 true scaffold_8: 8337486-8345950 Capsella rubella
Carub.0008s1505 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8340951-8345950 Capsella rubella
Carub.0008s1505 5.0kb downstream 5.0kb downstream 8465 true scaffold_8: 8332486-8340950 Capsella rubella
Carub.0008s1505 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8332486-8337485 Capsella rubella
Carub.0008s1505 10.0kb upstream 10.0kb upstream 13465 true scaffold_8: 8337486-8350950 Capsella rubella
Carub.0008s1505 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8340951-8350950 Capsella rubella
Carub.0008s1505 10.0kb downstream 10.0kb downstream 13465 true scaffold_8: 8327486-8340950 Capsella rubella
Carub.0008s1505 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8327486-8337485 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375547 5261 Brassicaceae View MSA
123838028 5264 Brassicales-Malvales View MSA
124342242 5266 SBM View MSA
124253987 5268 Malvidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain