Gene : Carub.0008s1522 C. rubella v1.1
Defline:  (1 of 2) PTHR12854//PTHR12854:SF12 - ATAXIN 2-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1522
Name:  ? Carub.0008s1522 Secondary Identifier:  ? PAC:39251233
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1522 0.5kb upstream 0.5kb upstream 4313 true scaffold_8: 8411579-8415891 Capsella rubella
Carub.0008s1522 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8411579-8412078 Capsella rubella
Carub.0008s1522 0.5kb downstream 0.5kb downstream 4313 true scaffold_8: 8412079-8416391 Capsella rubella
Carub.0008s1522 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8415892-8416391 Capsella rubella
Carub.0008s1522 1.0kb upstream 1.0kb upstream 4813 true scaffold_8: 8411079-8415891 Capsella rubella
Carub.0008s1522 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8411079-8412078 Capsella rubella
Carub.0008s1522 1.0kb downstream 1.0kb downstream 4813 true scaffold_8: 8412079-8416891 Capsella rubella
Carub.0008s1522 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8415892-8416891 Capsella rubella
Carub.0008s1522 2.0kb upstream 2.0kb upstream 5813 true scaffold_8: 8410079-8415891 Capsella rubella
Carub.0008s1522 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8410079-8412078 Capsella rubella
Carub.0008s1522 2.0kb downstream 2.0kb downstream 5813 true scaffold_8: 8412079-8417891 Capsella rubella
Carub.0008s1522 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8415892-8417891 Capsella rubella
Carub.0008s1522 5.0kb upstream 5.0kb upstream 8813 true scaffold_8: 8407079-8415891 Capsella rubella
Carub.0008s1522 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8407079-8412078 Capsella rubella
Carub.0008s1522 5.0kb downstream 5.0kb downstream 8813 true scaffold_8: 8412079-8420891 Capsella rubella
Carub.0008s1522 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8415892-8420891 Capsella rubella
Carub.0008s1522 10.0kb upstream 10.0kb upstream 13813 true scaffold_8: 8402079-8415891 Capsella rubella
Carub.0008s1522 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8402079-8412078 Capsella rubella
Carub.0008s1522 10.0kb downstream 10.0kb downstream 13813 true scaffold_8: 8412079-8425891 Capsella rubella
Carub.0008s1522 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8415892-8425891 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343158 5261 Brassicaceae View MSA
123839722 5264 Brassicales-Malvales View MSA
124338040 5266 SBM View MSA
124244261 5268 Malvidae View MSA
124064647 5270 Rosid View MSA
123736552 5271 Pentapetalae View MSA
122787256 5272 Eudicot View MSA
122047595 5273 Angiosperm View MSA
121310768 5274 Embryophyte View MSA
123348174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain