Gene : Carub.0008s1535 C. rubella v1.1
Defline:  (1 of 2) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  1535
Name:  ? Carub.0008s1535 Secondary Identifier:  ? PAC:39252986
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5084 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1535 0.5kb upstream 0.5kb upstream 3994 true scaffold_8: 8458093-8462086 Capsella rubella
Carub.0008s1535 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8458093-8458592 Capsella rubella
Carub.0008s1535 0.5kb downstream 0.5kb downstream 3994 true scaffold_8: 8458593-8462586 Capsella rubella
Carub.0008s1535 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8462087-8462586 Capsella rubella
Carub.0008s1535 1.0kb upstream 1.0kb upstream 4494 true scaffold_8: 8457593-8462086 Capsella rubella
Carub.0008s1535 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8457593-8458592 Capsella rubella
Carub.0008s1535 1.0kb downstream 1.0kb downstream 4494 true scaffold_8: 8458593-8463086 Capsella rubella
Carub.0008s1535 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8462087-8463086 Capsella rubella
Carub.0008s1535 2.0kb upstream 2.0kb upstream 5494 true scaffold_8: 8456593-8462086 Capsella rubella
Carub.0008s1535 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8456593-8458592 Capsella rubella
Carub.0008s1535 2.0kb downstream 2.0kb downstream 5494 true scaffold_8: 8458593-8464086 Capsella rubella
Carub.0008s1535 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8462087-8464086 Capsella rubella
Carub.0008s1535 5.0kb upstream 5.0kb upstream 8494 true scaffold_8: 8453593-8462086 Capsella rubella
Carub.0008s1535 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8453593-8458592 Capsella rubella
Carub.0008s1535 5.0kb downstream 5.0kb downstream 8494 true scaffold_8: 8458593-8467086 Capsella rubella
Carub.0008s1535 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8462087-8467086 Capsella rubella
Carub.0008s1535 10.0kb upstream 10.0kb upstream 13494 true scaffold_8: 8448593-8462086 Capsella rubella
Carub.0008s1535 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8448593-8458592 Capsella rubella
Carub.0008s1535 10.0kb downstream 10.0kb downstream 13494 true scaffold_8: 8458593-8472086 Capsella rubella
Carub.0008s1535 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8462087-8472086 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362639 5261 Brassicaceae View MSA
123838684 5264 Brassicales-Malvales View MSA
124343102 5266 SBM View MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain