Gene : Carub.0008s1046 C. rubella v1.1
Defline:  (1 of 2) PTHR23359//PTHR23359:SF99 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1046
Name:  ? Carub.0008s1046 Secondary Identifier:  ? PAC:39251843
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6126 Capsella rubella pathologic  
Crubella PWY-7219 Capsella rubella pathologic  
Crubella PWY-7229 Capsella rubella pathologic  
Crubella PWY-841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1046 0.5kb upstream 0.5kb upstream 2055 true scaffold_8: 6453296-6455350 Capsella rubella
Carub.0008s1046 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6454851-6455350 Capsella rubella
Carub.0008s1046 0.5kb downstream 0.5kb downstream 2055 true scaffold_8: 6452796-6454850 Capsella rubella
Carub.0008s1046 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6452796-6453295 Capsella rubella
Carub.0008s1046 1.0kb upstream 1.0kb upstream 2555 true scaffold_8: 6453296-6455850 Capsella rubella
Carub.0008s1046 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6454851-6455850 Capsella rubella
Carub.0008s1046 1.0kb downstream 1.0kb downstream 2555 true scaffold_8: 6452296-6454850 Capsella rubella
Carub.0008s1046 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6452296-6453295 Capsella rubella
Carub.0008s1046 2.0kb upstream 2.0kb upstream 3555 true scaffold_8: 6453296-6456850 Capsella rubella
Carub.0008s1046 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6454851-6456850 Capsella rubella
Carub.0008s1046 2.0kb downstream 2.0kb downstream 3555 true scaffold_8: 6451296-6454850 Capsella rubella
Carub.0008s1046 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6451296-6453295 Capsella rubella
Carub.0008s1046 5.0kb upstream 5.0kb upstream 6555 true scaffold_8: 6453296-6459850 Capsella rubella
Carub.0008s1046 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6454851-6459850 Capsella rubella
Carub.0008s1046 5.0kb downstream 5.0kb downstream 6555 true scaffold_8: 6448296-6454850 Capsella rubella
Carub.0008s1046 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6448296-6453295 Capsella rubella
Carub.0008s1046 10.0kb upstream 10.0kb upstream 11555 true scaffold_8: 6453296-6464850 Capsella rubella
Carub.0008s1046 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6454851-6464850 Capsella rubella
Carub.0008s1046 10.0kb downstream 10.0kb downstream 11555 true scaffold_8: 6443296-6454850 Capsella rubella
Carub.0008s1046 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6443296-6453295 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041419 5273 Angiosperm View MSA
122375870 5261 Brassicaceae View MSA
123838087 5264 Brassicales-Malvales View MSA
124351615 5266 SBM View MSA
124244801 5268 Malvidae View MSA
124069606 5270 Rosid View MSA
123746649 5271 Pentapetalae View MSA
122795443 5272 Eudicot View MSA
121350908 5274 Embryophyte View MSA
123427854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain