Gene : Carub.0008s1290 C. rubella v1.1
Defline:  (1 of 8) PTHR22814//PTHR22814:SF129 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // COPPER TRANSPORT FAMILY PROTEIN-RELATED Genomic Order:  1290
Name:  ? Carub.0008s1290 Secondary Identifier:  ? PAC:39250602
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1290 0.5kb upstream 0.5kb upstream 1175 true scaffold_8: 7447135-7448309 Capsella rubella
Carub.0008s1290 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7447135-7447634 Capsella rubella
Carub.0008s1290 0.5kb downstream 0.5kb downstream 1175 true scaffold_8: 7447635-7448809 Capsella rubella
Carub.0008s1290 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7448310-7448809 Capsella rubella
Carub.0008s1290 1.0kb upstream 1.0kb upstream 1675 true scaffold_8: 7446635-7448309 Capsella rubella
Carub.0008s1290 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7446635-7447634 Capsella rubella
Carub.0008s1290 1.0kb downstream 1.0kb downstream 1675 true scaffold_8: 7447635-7449309 Capsella rubella
Carub.0008s1290 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7448310-7449309 Capsella rubella
Carub.0008s1290 2.0kb upstream 2.0kb upstream 2675 true scaffold_8: 7445635-7448309 Capsella rubella
Carub.0008s1290 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7445635-7447634 Capsella rubella
Carub.0008s1290 2.0kb downstream 2.0kb downstream 2675 true scaffold_8: 7447635-7450309 Capsella rubella
Carub.0008s1290 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7448310-7450309 Capsella rubella
Carub.0008s1290 5.0kb upstream 5.0kb upstream 5675 true scaffold_8: 7442635-7448309 Capsella rubella
Carub.0008s1290 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7442635-7447634 Capsella rubella
Carub.0008s1290 5.0kb downstream 5.0kb downstream 5675 true scaffold_8: 7447635-7453309 Capsella rubella
Carub.0008s1290 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7448310-7453309 Capsella rubella
Carub.0008s1290 10.0kb upstream 10.0kb upstream 10675 true scaffold_8: 7437635-7448309 Capsella rubella
Carub.0008s1290 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7437635-7447634 Capsella rubella
Carub.0008s1290 10.0kb downstream 10.0kb downstream 10675 true scaffold_8: 7447635-7458309 Capsella rubella
Carub.0008s1290 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7448310-7458309 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381366 5261 Brassicaceae View MSA
123838445 5264 Brassicales-Malvales View MSA
124349979 5266 SBM View MSA
124250678 5268 Malvidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain