Gene : Carub.0008s0969 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.12 - Methionine S-methyltransferase Genomic Order:  969
Name:  ? Carub.0008s0969 Secondary Identifier:  ? PAC:39251334
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5441 Capsella rubella pathologic  
Crubella PWY-6054 Capsella rubella pathologic  
Crubella PWY-6931 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0969 0.5kb upstream 0.5kb upstream 7469 true scaffold_8: 6166727-6174195 Capsella rubella
Carub.0008s0969 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6166727-6167226 Capsella rubella
Carub.0008s0969 0.5kb downstream 0.5kb downstream 7469 true scaffold_8: 6167227-6174695 Capsella rubella
Carub.0008s0969 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6174196-6174695 Capsella rubella
Carub.0008s0969 1.0kb upstream 1.0kb upstream 7969 true scaffold_8: 6166227-6174195 Capsella rubella
Carub.0008s0969 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6166227-6167226 Capsella rubella
Carub.0008s0969 1.0kb downstream 1.0kb downstream 7969 true scaffold_8: 6167227-6175195 Capsella rubella
Carub.0008s0969 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6174196-6175195 Capsella rubella
Carub.0008s0969 2.0kb upstream 2.0kb upstream 8969 true scaffold_8: 6165227-6174195 Capsella rubella
Carub.0008s0969 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6165227-6167226 Capsella rubella
Carub.0008s0969 2.0kb downstream 2.0kb downstream 8969 true scaffold_8: 6167227-6176195 Capsella rubella
Carub.0008s0969 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6174196-6176195 Capsella rubella
Carub.0008s0969 5.0kb upstream 5.0kb upstream 11969 true scaffold_8: 6162227-6174195 Capsella rubella
Carub.0008s0969 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6162227-6167226 Capsella rubella
Carub.0008s0969 5.0kb downstream 5.0kb downstream 11969 true scaffold_8: 6167227-6179195 Capsella rubella
Carub.0008s0969 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6174196-6179195 Capsella rubella
Carub.0008s0969 10.0kb upstream 10.0kb upstream 16969 true scaffold_8: 6157227-6174195 Capsella rubella
Carub.0008s0969 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6157227-6167226 Capsella rubella
Carub.0008s0969 10.0kb downstream 10.0kb downstream 16969 true scaffold_8: 6167227-6184195 Capsella rubella
Carub.0008s0969 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6174196-6184195 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365008 5261 Brassicaceae View MSA
123835042 5264 Brassicales-Malvales View MSA
124342755 5266 SBM View MSA
124240055 5268 Malvidae View MSA
124060886 5270 Rosid View MSA
123740087 5271 Pentapetalae View MSA
122793116 5272 Eudicot View MSA
122045500 5273 Angiosperm View MSA
121345934 5274 Embryophyte View MSA
123380293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain