Gene : Carub.0008s0987 C. rubella v1.1
Defline:  (1 of 1) 1.4.3.5//5.1.99.6 - Pyridoxal 5'-phosphate synthase / Pyridoxine (pyridoxamine)phosphate oxidase // NAD(P)H-hydrate epimerase / NAD(P)HX epimerase Genomic Order:  987
Name:  ? Carub.0008s0987 Secondary Identifier:  ? PAC:39252095
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PLPSAL-PWY Capsella rubella pathologic  
Crubella PWY-6938 Capsella rubella pathologic  
Crubella PWY-7204 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0987 0.5kb upstream 0.5kb upstream 4370 true scaffold_8: 6245556-6249925 Capsella rubella
Carub.0008s0987 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6245556-6246055 Capsella rubella
Carub.0008s0987 0.5kb downstream 0.5kb downstream 4370 true scaffold_8: 6246056-6250425 Capsella rubella
Carub.0008s0987 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6249926-6250425 Capsella rubella
Carub.0008s0987 1.0kb upstream 1.0kb upstream 4870 true scaffold_8: 6245056-6249925 Capsella rubella
Carub.0008s0987 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6245056-6246055 Capsella rubella
Carub.0008s0987 1.0kb downstream 1.0kb downstream 4870 true scaffold_8: 6246056-6250925 Capsella rubella
Carub.0008s0987 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6249926-6250925 Capsella rubella
Carub.0008s0987 2.0kb upstream 2.0kb upstream 5870 true scaffold_8: 6244056-6249925 Capsella rubella
Carub.0008s0987 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6244056-6246055 Capsella rubella
Carub.0008s0987 2.0kb downstream 2.0kb downstream 5870 true scaffold_8: 6246056-6251925 Capsella rubella
Carub.0008s0987 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6249926-6251925 Capsella rubella
Carub.0008s0987 5.0kb upstream 5.0kb upstream 8870 true scaffold_8: 6241056-6249925 Capsella rubella
Carub.0008s0987 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6241056-6246055 Capsella rubella
Carub.0008s0987 5.0kb downstream 5.0kb downstream 8870 true scaffold_8: 6246056-6254925 Capsella rubella
Carub.0008s0987 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6249926-6254925 Capsella rubella
Carub.0008s0987 10.0kb upstream 10.0kb upstream 13870 true scaffold_8: 6236056-6249925 Capsella rubella
Carub.0008s0987 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6236056-6246055 Capsella rubella
Carub.0008s0987 10.0kb downstream 10.0kb downstream 13870 true scaffold_8: 6246056-6259925 Capsella rubella
Carub.0008s0987 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6249926-6259925 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362150 5261 Brassicaceae View MSA
123832623 5264 Brassicales-Malvales View MSA
124345777 5266 SBM View MSA
124239161 5268 Malvidae View MSA
124062248 5270 Rosid View MSA
123736621 5271 Pentapetalae View MSA
122791647 5272 Eudicot View MSA
122043003 5273 Angiosperm View MSA
121346013 5274 Embryophyte View MSA
123424546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain