Gene : Carub.0008s1012 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.170 - 16S rRNA (guanine(527)-N(7))-methyltransferase Genomic Order:  1012
Name:  ? Carub.0008s1012 Secondary Identifier:  ? PAC:39250802
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1012 0.5kb upstream 0.5kb upstream 2938 true scaffold_8: 6311771-6314708 Capsella rubella
Carub.0008s1012 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6311771-6312270 Capsella rubella
Carub.0008s1012 0.5kb downstream 0.5kb downstream 2938 true scaffold_8: 6312271-6315208 Capsella rubella
Carub.0008s1012 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6314709-6315208 Capsella rubella
Carub.0008s1012 1.0kb upstream 1.0kb upstream 3438 true scaffold_8: 6311271-6314708 Capsella rubella
Carub.0008s1012 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6311271-6312270 Capsella rubella
Carub.0008s1012 1.0kb downstream 1.0kb downstream 3438 true scaffold_8: 6312271-6315708 Capsella rubella
Carub.0008s1012 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6314709-6315708 Capsella rubella
Carub.0008s1012 2.0kb upstream 2.0kb upstream 4438 true scaffold_8: 6310271-6314708 Capsella rubella
Carub.0008s1012 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6310271-6312270 Capsella rubella
Carub.0008s1012 2.0kb downstream 2.0kb downstream 4438 true scaffold_8: 6312271-6316708 Capsella rubella
Carub.0008s1012 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6314709-6316708 Capsella rubella
Carub.0008s1012 5.0kb upstream 5.0kb upstream 7438 true scaffold_8: 6307271-6314708 Capsella rubella
Carub.0008s1012 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6307271-6312270 Capsella rubella
Carub.0008s1012 5.0kb downstream 5.0kb downstream 7438 true scaffold_8: 6312271-6319708 Capsella rubella
Carub.0008s1012 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6314709-6319708 Capsella rubella
Carub.0008s1012 10.0kb upstream 10.0kb upstream 12438 true scaffold_8: 6302271-6314708 Capsella rubella
Carub.0008s1012 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6302271-6312270 Capsella rubella
Carub.0008s1012 10.0kb downstream 10.0kb downstream 12438 true scaffold_8: 6312271-6324708 Capsella rubella
Carub.0008s1012 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6314709-6324708 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379102 5261 Brassicaceae View MSA
123835275 5264 Brassicales-Malvales View MSA
124348091 5266 SBM View MSA
124239529 5268 Malvidae View MSA
124063822 5270 Rosid View MSA
123747050 5271 Pentapetalae View MSA
122788459 5272 Eudicot View MSA
122046579 5273 Angiosperm View MSA
121348098 5274 Embryophyte View MSA
123428344 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain