Gene : Carub.0008s1022 C. rubella v1.1
Defline:  (1 of 1) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  1022
Name:  ? Carub.0008s1022 Secondary Identifier:  ? PAC:39250339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PYRIDNUCSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1022 0.5kb upstream 0.5kb upstream 3846 true scaffold_8: 6364784-6368629 Capsella rubella
Carub.0008s1022 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6364784-6365283 Capsella rubella
Carub.0008s1022 0.5kb downstream 0.5kb downstream 3846 true scaffold_8: 6365284-6369129 Capsella rubella
Carub.0008s1022 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6368630-6369129 Capsella rubella
Carub.0008s1022 1.0kb upstream 1.0kb upstream 4346 true scaffold_8: 6364284-6368629 Capsella rubella
Carub.0008s1022 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6364284-6365283 Capsella rubella
Carub.0008s1022 1.0kb downstream 1.0kb downstream 4346 true scaffold_8: 6365284-6369629 Capsella rubella
Carub.0008s1022 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6368630-6369629 Capsella rubella
Carub.0008s1022 2.0kb upstream 2.0kb upstream 5346 true scaffold_8: 6363284-6368629 Capsella rubella
Carub.0008s1022 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6363284-6365283 Capsella rubella
Carub.0008s1022 2.0kb downstream 2.0kb downstream 5346 true scaffold_8: 6365284-6370629 Capsella rubella
Carub.0008s1022 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6368630-6370629 Capsella rubella
Carub.0008s1022 5.0kb upstream 5.0kb upstream 8346 true scaffold_8: 6360284-6368629 Capsella rubella
Carub.0008s1022 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6360284-6365283 Capsella rubella
Carub.0008s1022 5.0kb downstream 5.0kb downstream 8346 true scaffold_8: 6365284-6373629 Capsella rubella
Carub.0008s1022 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6368630-6373629 Capsella rubella
Carub.0008s1022 10.0kb upstream 10.0kb upstream 13346 true scaffold_8: 6355284-6368629 Capsella rubella
Carub.0008s1022 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6355284-6365283 Capsella rubella
Carub.0008s1022 10.0kb downstream 10.0kb downstream 13346 true scaffold_8: 6365284-6378629 Capsella rubella
Carub.0008s1022 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6368630-6378629 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373210 5261 Brassicaceae View MSA
123834496 5264 Brassicales-Malvales View MSA
124344776 5266 SBM View MSA
124241572 5268 Malvidae View MSA
124063584 5270 Rosid View MSA
123753415 5271 Pentapetalae View MSA
122792816 5272 Eudicot View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain