Gene : Carub.0006s0574 C. rubella v1.1
Defline:  (1 of 1) PTHR10024:SF236 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  574
Name:  ? Carub.0006s0574 Secondary Identifier:  ? PAC:39248767
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0574 0.5kb upstream 0.5kb upstream 3192 true scaffold_6: 2115836-2119027 Capsella rubella
Carub.0006s0574 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2118528-2119027 Capsella rubella
Carub.0006s0574 0.5kb downstream 0.5kb downstream 3192 true scaffold_6: 2115336-2118527 Capsella rubella
Carub.0006s0574 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2115336-2115835 Capsella rubella
Carub.0006s0574 1.0kb upstream 1.0kb upstream 3692 true scaffold_6: 2115836-2119527 Capsella rubella
Carub.0006s0574 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2118528-2119527 Capsella rubella
Carub.0006s0574 1.0kb downstream 1.0kb downstream 3692 true scaffold_6: 2114836-2118527 Capsella rubella
Carub.0006s0574 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2114836-2115835 Capsella rubella
Carub.0006s0574 2.0kb upstream 2.0kb upstream 4692 true scaffold_6: 2115836-2120527 Capsella rubella
Carub.0006s0574 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2118528-2120527 Capsella rubella
Carub.0006s0574 2.0kb downstream 2.0kb downstream 4692 true scaffold_6: 2113836-2118527 Capsella rubella
Carub.0006s0574 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2113836-2115835 Capsella rubella
Carub.0006s0574 5.0kb upstream 5.0kb upstream 7692 true scaffold_6: 2115836-2123527 Capsella rubella
Carub.0006s0574 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2118528-2123527 Capsella rubella
Carub.0006s0574 5.0kb downstream 5.0kb downstream 7692 true scaffold_6: 2110836-2118527 Capsella rubella
Carub.0006s0574 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2110836-2115835 Capsella rubella
Carub.0006s0574 10.0kb upstream 10.0kb upstream 12692 true scaffold_6: 2115836-2128527 Capsella rubella
Carub.0006s0574 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2118528-2128527 Capsella rubella
Carub.0006s0574 10.0kb downstream 10.0kb downstream 12692 true scaffold_6: 2105836-2118527 Capsella rubella
Carub.0006s0574 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2105836-2115835 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364098 5261 Brassicaceae View MSA
123830422 5264 Brassicales-Malvales View MSA
124342144 5266 SBM View MSA
124240863 5268 Malvidae View MSA
124063852 5270 Rosid View MSA
123737482 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain