Gene : Carub.0004s0064 C. rubella v1.1
Defline:  (1 of 2) PTHR31321//PTHR31321:SF10 - FAMILY NOT NAMED // PECTINESTERASE 11-RELATED Genomic Order:  64
Name:  ? Carub.0004s0064 Secondary Identifier:  ? PAC:39237940
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0064 0.5kb upstream 0.5kb upstream 2568 true scaffold_4: 239289-241856 Capsella rubella
Carub.0004s0064 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 241357-241856 Capsella rubella
Carub.0004s0064 0.5kb downstream 0.5kb downstream 2568 true scaffold_4: 238789-241356 Capsella rubella
Carub.0004s0064 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 238789-239288 Capsella rubella
Carub.0004s0064 1.0kb upstream 1.0kb upstream 3068 true scaffold_4: 239289-242356 Capsella rubella
Carub.0004s0064 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 241357-242356 Capsella rubella
Carub.0004s0064 1.0kb downstream 1.0kb downstream 3068 true scaffold_4: 238289-241356 Capsella rubella
Carub.0004s0064 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 238289-239288 Capsella rubella
Carub.0004s0064 2.0kb upstream 2.0kb upstream 4068 true scaffold_4: 239289-243356 Capsella rubella
Carub.0004s0064 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 241357-243356 Capsella rubella
Carub.0004s0064 2.0kb downstream 2.0kb downstream 4068 true scaffold_4: 237289-241356 Capsella rubella
Carub.0004s0064 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 237289-239288 Capsella rubella
Carub.0004s0064 5.0kb upstream 5.0kb upstream 7068 true scaffold_4: 239289-246356 Capsella rubella
Carub.0004s0064 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 241357-246356 Capsella rubella
Carub.0004s0064 5.0kb downstream 5.0kb downstream 7068 true scaffold_4: 234289-241356 Capsella rubella
Carub.0004s0064 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 234289-239288 Capsella rubella
Carub.0004s0064 10.0kb upstream 10.0kb upstream 12068 true scaffold_4: 239289-251356 Capsella rubella
Carub.0004s0064 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 241357-251356 Capsella rubella
Carub.0004s0064 10.0kb downstream 10.0kb downstream 12068 true scaffold_4: 229289-241356 Capsella rubella
Carub.0004s0064 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 229289-239288 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362466 5261 Brassicaceae View MSA
123839832 5264 Brassicales-Malvales View MSA
124346446 5266 SBM View MSA
124241486 5268 Malvidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain