Gene : Carub.0004s0084 C. rubella v1.1
Defline:  (1 of 3) K10807 - ribonucleoside-diphosphate reductase subunit M1 (RRM1) Genomic Order:  84
Name:  ? Carub.0004s0084 Secondary Identifier:  ? PAC:39238278
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6126 Capsella rubella pathologic  
Crubella PWY-6545 Capsella rubella pathologic  
Crubella PWY-7184 Capsella rubella pathologic  
Crubella PWY-7210 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  
Crubella PWY-7220 Capsella rubella pathologic  
Crubella PWY-7222 Capsella rubella pathologic  
Crubella PWY-7226 Capsella rubella pathologic  
Crubella PWY-7227 Capsella rubella pathologic  
Crubella PWY-7228 Capsella rubella pathologic  
Crubella PWY-7229 Capsella rubella pathologic  
Crubella PWY-841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0084 0.5kb upstream 0.5kb upstream 4998 true scaffold_4: 292885-297882 Capsella rubella
Carub.0004s0084 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 292885-293384 Capsella rubella
Carub.0004s0084 0.5kb downstream 0.5kb downstream 4998 true scaffold_4: 293385-298382 Capsella rubella
Carub.0004s0084 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 297883-298382 Capsella rubella
Carub.0004s0084 1.0kb upstream 1.0kb upstream 5498 true scaffold_4: 292385-297882 Capsella rubella
Carub.0004s0084 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 292385-293384 Capsella rubella
Carub.0004s0084 1.0kb downstream 1.0kb downstream 5498 true scaffold_4: 293385-298882 Capsella rubella
Carub.0004s0084 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 297883-298882 Capsella rubella
Carub.0004s0084 2.0kb upstream 2.0kb upstream 6498 true scaffold_4: 291385-297882 Capsella rubella
Carub.0004s0084 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 291385-293384 Capsella rubella
Carub.0004s0084 2.0kb downstream 2.0kb downstream 6498 true scaffold_4: 293385-299882 Capsella rubella
Carub.0004s0084 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 297883-299882 Capsella rubella
Carub.0004s0084 5.0kb upstream 5.0kb upstream 9498 true scaffold_4: 288385-297882 Capsella rubella
Carub.0004s0084 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 288385-293384 Capsella rubella
Carub.0004s0084 5.0kb downstream 5.0kb downstream 9498 true scaffold_4: 293385-302882 Capsella rubella
Carub.0004s0084 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 297883-302882 Capsella rubella
Carub.0004s0084 10.0kb upstream 10.0kb upstream 14498 true scaffold_4: 283385-297882 Capsella rubella
Carub.0004s0084 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 283385-293384 Capsella rubella
Carub.0004s0084 10.0kb downstream 10.0kb downstream 14498 true scaffold_4: 293385-307882 Capsella rubella
Carub.0004s0084 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 297883-307882 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365382 5261 Brassicaceae View MSA
123834917 5264 Brassicales-Malvales View MSA
124342571 5266 SBM View MSA
124247315 5268 Malvidae View MSA
124065461 5270 Rosid View MSA
123747957 5271 Pentapetalae View MSA
122795256 5272 Eudicot View MSA
122044157 5273 Angiosperm View MSA
121347545 5274 Embryophyte View MSA
123424335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain