Gene : Carub.0004s0203 C. rubella v1.1
Defline:  (1 of 1) PTHR31311//PTHR31311:SF3 - FAMILY NOT NAMED // GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  203
Name:  ? Carub.0004s0203 Secondary Identifier:  ? PAC:39236835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5936 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0203 0.5kb upstream 0.5kb upstream 2653 true scaffold_4: 819453-822105 Capsella rubella
Carub.0004s0203 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 821606-822105 Capsella rubella
Carub.0004s0203 0.5kb downstream 0.5kb downstream 2653 true scaffold_4: 818953-821605 Capsella rubella
Carub.0004s0203 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 818953-819452 Capsella rubella
Carub.0004s0203 1.0kb upstream 1.0kb upstream 3153 true scaffold_4: 819453-822605 Capsella rubella
Carub.0004s0203 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 821606-822605 Capsella rubella
Carub.0004s0203 1.0kb downstream 1.0kb downstream 3153 true scaffold_4: 818453-821605 Capsella rubella
Carub.0004s0203 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 818453-819452 Capsella rubella
Carub.0004s0203 2.0kb upstream 2.0kb upstream 4153 true scaffold_4: 819453-823605 Capsella rubella
Carub.0004s0203 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 821606-823605 Capsella rubella
Carub.0004s0203 2.0kb downstream 2.0kb downstream 4153 true scaffold_4: 817453-821605 Capsella rubella
Carub.0004s0203 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 817453-819452 Capsella rubella
Carub.0004s0203 5.0kb upstream 5.0kb upstream 7153 true scaffold_4: 819453-826605 Capsella rubella
Carub.0004s0203 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 821606-826605 Capsella rubella
Carub.0004s0203 5.0kb downstream 5.0kb downstream 7153 true scaffold_4: 814453-821605 Capsella rubella
Carub.0004s0203 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 814453-819452 Capsella rubella
Carub.0004s0203 10.0kb upstream 10.0kb upstream 12153 true scaffold_4: 819453-831605 Capsella rubella
Carub.0004s0203 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 821606-831605 Capsella rubella
Carub.0004s0203 10.0kb downstream 10.0kb downstream 12153 true scaffold_4: 809453-821605 Capsella rubella
Carub.0004s0203 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 809453-819452 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122378739 5261 Brassicaceae View MSA
123827372 5264 Brassicales-Malvales View MSA
124337497 5266 SBM View MSA
124238551 5268 Malvidae View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain