Gene : Carub.0004s0140 C. rubella v1.1
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  140
Name:  ? Carub.0004s0140 Secondary Identifier:  ? PAC:39237506
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0140 0.5kb upstream 0.5kb upstream 1986 true scaffold_4: 515988-517973 Capsella rubella
Carub.0004s0140 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 515988-516487 Capsella rubella
Carub.0004s0140 0.5kb downstream 0.5kb downstream 1986 true scaffold_4: 516488-518473 Capsella rubella
Carub.0004s0140 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 517974-518473 Capsella rubella
Carub.0004s0140 1.0kb upstream 1.0kb upstream 2486 true scaffold_4: 515488-517973 Capsella rubella
Carub.0004s0140 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 515488-516487 Capsella rubella
Carub.0004s0140 1.0kb downstream 1.0kb downstream 2486 true scaffold_4: 516488-518973 Capsella rubella
Carub.0004s0140 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 517974-518973 Capsella rubella
Carub.0004s0140 2.0kb upstream 2.0kb upstream 3486 true scaffold_4: 514488-517973 Capsella rubella
Carub.0004s0140 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 514488-516487 Capsella rubella
Carub.0004s0140 2.0kb downstream 2.0kb downstream 3486 true scaffold_4: 516488-519973 Capsella rubella
Carub.0004s0140 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 517974-519973 Capsella rubella
Carub.0004s0140 5.0kb upstream 5.0kb upstream 6486 true scaffold_4: 511488-517973 Capsella rubella
Carub.0004s0140 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 511488-516487 Capsella rubella
Carub.0004s0140 5.0kb downstream 5.0kb downstream 6486 true scaffold_4: 516488-522973 Capsella rubella
Carub.0004s0140 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 517974-522973 Capsella rubella
Carub.0004s0140 10.0kb upstream 10.0kb upstream 11486 true scaffold_4: 506488-517973 Capsella rubella
Carub.0004s0140 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 506488-516487 Capsella rubella
Carub.0004s0140 10.0kb downstream 10.0kb downstream 11486 true scaffold_4: 516488-527973 Capsella rubella
Carub.0004s0140 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 517974-527973 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361949 5261 Brassicaceae View MSA
123831862 5264 Brassicales-Malvales View MSA
124344004 5266 SBM View MSA
124237545 5268 Malvidae View MSA
124050829 5270 Rosid View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain