Gene : Carub.0004s0179 C. rubella v1.1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Genomic Order:  179
Name:  ? Carub.0004s0179 Secondary Identifier:  ? PAC:39236046
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0179 0.5kb upstream 0.5kb upstream 3437 true scaffold_4: 693726-697162 Capsella rubella
Carub.0004s0179 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 693726-694225 Capsella rubella
Carub.0004s0179 0.5kb downstream 0.5kb downstream 3437 true scaffold_4: 694226-697662 Capsella rubella
Carub.0004s0179 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 697163-697662 Capsella rubella
Carub.0004s0179 1.0kb upstream 1.0kb upstream 3937 true scaffold_4: 693226-697162 Capsella rubella
Carub.0004s0179 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 693226-694225 Capsella rubella
Carub.0004s0179 1.0kb downstream 1.0kb downstream 3937 true scaffold_4: 694226-698162 Capsella rubella
Carub.0004s0179 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 697163-698162 Capsella rubella
Carub.0004s0179 2.0kb upstream 2.0kb upstream 4937 true scaffold_4: 692226-697162 Capsella rubella
Carub.0004s0179 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 692226-694225 Capsella rubella
Carub.0004s0179 2.0kb downstream 2.0kb downstream 4937 true scaffold_4: 694226-699162 Capsella rubella
Carub.0004s0179 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 697163-699162 Capsella rubella
Carub.0004s0179 5.0kb upstream 5.0kb upstream 7937 true scaffold_4: 689226-697162 Capsella rubella
Carub.0004s0179 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 689226-694225 Capsella rubella
Carub.0004s0179 5.0kb downstream 5.0kb downstream 7937 true scaffold_4: 694226-702162 Capsella rubella
Carub.0004s0179 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 697163-702162 Capsella rubella
Carub.0004s0179 10.0kb upstream 10.0kb upstream 12937 true scaffold_4: 684226-697162 Capsella rubella
Carub.0004s0179 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 684226-694225 Capsella rubella
Carub.0004s0179 10.0kb downstream 10.0kb downstream 12937 true scaffold_4: 694226-707162 Capsella rubella
Carub.0004s0179 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 697163-707162 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378353 5261 Brassicaceae View MSA
123841544 5264 Brassicales-Malvales View MSA
124351591 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain