Gene : Carub.0008s2637 C. rubella v1.1

Defline:  (1 of 2) PTHR32467//PTHR32467:SF33 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6-RELATED Genomic Order:  2637
Name:  ? Carub.0008s2637 Secondary Identifier:  ? PAC:39250448

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2637 0.5kb upstream 0.5kb upstream 4372 true scaffold_8: 12556870-12561241 Capsella rubella
Carub.0008s2637 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12556870-12557369 Capsella rubella
Carub.0008s2637 0.5kb downstream 0.5kb downstream 4372 true scaffold_8: 12557370-12561741 Capsella rubella
Carub.0008s2637 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12561242-12561741 Capsella rubella
Carub.0008s2637 1.0kb upstream 1.0kb upstream 4872 true scaffold_8: 12556370-12561241 Capsella rubella
Carub.0008s2637 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12556370-12557369 Capsella rubella
Carub.0008s2637 1.0kb downstream 1.0kb downstream 4872 true scaffold_8: 12557370-12562241 Capsella rubella
Carub.0008s2637 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12561242-12562241 Capsella rubella
Carub.0008s2637 2.0kb upstream 2.0kb upstream 5872 true scaffold_8: 12555370-12561241 Capsella rubella
Carub.0008s2637 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12555370-12557369 Capsella rubella
Carub.0008s2637 2.0kb downstream 2.0kb downstream 5872 true scaffold_8: 12557370-12563241 Capsella rubella
Carub.0008s2637 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12561242-12563241 Capsella rubella
Carub.0008s2637 5.0kb upstream 5.0kb upstream 8872 true scaffold_8: 12552370-12561241 Capsella rubella
Carub.0008s2637 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12552370-12557369 Capsella rubella
Carub.0008s2637 5.0kb downstream 5.0kb downstream 8872 true scaffold_8: 12557370-12566241 Capsella rubella
Carub.0008s2637 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12561242-12566241 Capsella rubella
Carub.0008s2637 10.0kb upstream 10.0kb upstream 13872 true scaffold_8: 12547370-12561241 Capsella rubella
Carub.0008s2637 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12547370-12557369 Capsella rubella
Carub.0008s2637 10.0kb downstream 10.0kb downstream 13872 true scaffold_8: 12557370-12571241 Capsella rubella
Carub.0008s2637 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12561242-12571241 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122376401 5261 Brassicaceae View MSA
123801239 5264 Brassicales-Malvales View MSA
124298564 5266 SBM View MSA
124150179 5268 Malvidae View MSA
124061008 5270 Rosid View MSA
123736704 5271 Pentapetalae View MSA
122790985 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain