Gene : Carub.0008s2797 C. rubella v1.1
Defline:  (1 of 1) PTHR10668//PTHR10668:SF83 - PHYTOENE DEHYDROGENASE // PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  2797
Name:  ? Carub.0008s2797 Secondary Identifier:  ? PAC:39252537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2797 0.5kb upstream 0.5kb upstream 4036 true scaffold_8: 13145872-13149907 Capsella rubella
Carub.0008s2797 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13149408-13149907 Capsella rubella
Carub.0008s2797 0.5kb downstream 0.5kb downstream 4036 true scaffold_8: 13145372-13149407 Capsella rubella
Carub.0008s2797 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13145372-13145871 Capsella rubella
Carub.0008s2797 1.0kb upstream 1.0kb upstream 4536 true scaffold_8: 13145872-13150407 Capsella rubella
Carub.0008s2797 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13149408-13150407 Capsella rubella
Carub.0008s2797 1.0kb downstream 1.0kb downstream 4536 true scaffold_8: 13144872-13149407 Capsella rubella
Carub.0008s2797 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13144872-13145871 Capsella rubella
Carub.0008s2797 2.0kb upstream 2.0kb upstream 5536 true scaffold_8: 13145872-13151407 Capsella rubella
Carub.0008s2797 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13149408-13151407 Capsella rubella
Carub.0008s2797 2.0kb downstream 2.0kb downstream 5536 true scaffold_8: 13143872-13149407 Capsella rubella
Carub.0008s2797 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13143872-13145871 Capsella rubella
Carub.0008s2797 5.0kb upstream 5.0kb upstream 8536 true scaffold_8: 13145872-13154407 Capsella rubella
Carub.0008s2797 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13149408-13154407 Capsella rubella
Carub.0008s2797 5.0kb downstream 5.0kb downstream 8536 true scaffold_8: 13140872-13149407 Capsella rubella
Carub.0008s2797 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13140872-13145871 Capsella rubella
Carub.0008s2797 10.0kb upstream 10.0kb upstream 13536 true scaffold_8: 13145872-13159407 Capsella rubella
Carub.0008s2797 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13149408-13159407 Capsella rubella
Carub.0008s2797 10.0kb downstream 10.0kb downstream 13536 true scaffold_8: 13135872-13149407 Capsella rubella
Carub.0008s2797 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13135872-13145871 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364524 5261 Brassicaceae View MSA
123834443 5264 Brassicales-Malvales View MSA
124341130 5266 SBM View MSA
124243064 5268 Malvidae View MSA
124065962 5270 Rosid View MSA
123745918 5271 Pentapetalae View MSA
122796852 5272 Eudicot View MSA
122043092 5273 Angiosperm View MSA
121344165 5274 Embryophyte View MSA
123379989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain