Gene : Carub.0008s2832 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.202 - Multisite-specific tRNA:(cytosine-C(5))-methyltransferase Genomic Order:  2832
Name:  ? Carub.0008s2832 Secondary Identifier:  ? PAC:39252269
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6829 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2832 0.5kb upstream 0.5kb upstream 3032 true scaffold_8: 13269209-13272240 Capsella rubella
Carub.0008s2832 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13271741-13272240 Capsella rubella
Carub.0008s2832 0.5kb downstream 0.5kb downstream 3032 true scaffold_8: 13268709-13271740 Capsella rubella
Carub.0008s2832 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13268709-13269208 Capsella rubella
Carub.0008s2832 1.0kb upstream 1.0kb upstream 3532 true scaffold_8: 13269209-13272740 Capsella rubella
Carub.0008s2832 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13271741-13272740 Capsella rubella
Carub.0008s2832 1.0kb downstream 1.0kb downstream 3532 true scaffold_8: 13268209-13271740 Capsella rubella
Carub.0008s2832 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13268209-13269208 Capsella rubella
Carub.0008s2832 2.0kb upstream 2.0kb upstream 4532 true scaffold_8: 13269209-13273740 Capsella rubella
Carub.0008s2832 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13271741-13273740 Capsella rubella
Carub.0008s2832 2.0kb downstream 2.0kb downstream 4532 true scaffold_8: 13267209-13271740 Capsella rubella
Carub.0008s2832 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13267209-13269208 Capsella rubella
Carub.0008s2832 5.0kb upstream 5.0kb upstream 7532 true scaffold_8: 13269209-13276740 Capsella rubella
Carub.0008s2832 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13271741-13276740 Capsella rubella
Carub.0008s2832 5.0kb downstream 5.0kb downstream 7532 true scaffold_8: 13264209-13271740 Capsella rubella
Carub.0008s2832 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13264209-13269208 Capsella rubella
Carub.0008s2832 10.0kb upstream 10.0kb upstream 12532 true scaffold_8: 13269209-13281740 Capsella rubella
Carub.0008s2832 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13271741-13281740 Capsella rubella
Carub.0008s2832 10.0kb downstream 10.0kb downstream 12532 true scaffold_8: 13259209-13271740 Capsella rubella
Carub.0008s2832 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13259209-13269208 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369256 5261 Brassicaceae View MSA
123833659 5264 Brassicales-Malvales View MSA
124342565 5266 SBM View MSA
124239700 5268 Malvidae View MSA
124050429 5270 Rosid View MSA
123737696 5271 Pentapetalae View MSA
122785944 5272 Eudicot View MSA
122044592 5273 Angiosperm View MSA
121346334 5274 Embryophyte View MSA
123425870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain