Gene : Carub.0008s2849 C. rubella v1.1
Defline:  (1 of 3) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  2849
Name:  ? Carub.0008s2849 Secondary Identifier:  ? PAC:39251440
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6368 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2849 0.5kb upstream 0.5kb upstream 4235 true scaffold_8: 13318622-13322856 Capsella rubella
Carub.0008s2849 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13318622-13319121 Capsella rubella
Carub.0008s2849 0.5kb downstream 0.5kb downstream 4235 true scaffold_8: 13319122-13323356 Capsella rubella
Carub.0008s2849 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13322857-13323356 Capsella rubella
Carub.0008s2849 1.0kb upstream 1.0kb upstream 4735 true scaffold_8: 13318122-13322856 Capsella rubella
Carub.0008s2849 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13318122-13319121 Capsella rubella
Carub.0008s2849 1.0kb downstream 1.0kb downstream 4735 true scaffold_8: 13319122-13323856 Capsella rubella
Carub.0008s2849 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13322857-13323856 Capsella rubella
Carub.0008s2849 2.0kb upstream 2.0kb upstream 5735 true scaffold_8: 13317122-13322856 Capsella rubella
Carub.0008s2849 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13317122-13319121 Capsella rubella
Carub.0008s2849 2.0kb downstream 2.0kb downstream 5735 true scaffold_8: 13319122-13324856 Capsella rubella
Carub.0008s2849 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13322857-13324856 Capsella rubella
Carub.0008s2849 5.0kb upstream 5.0kb upstream 8735 true scaffold_8: 13314122-13322856 Capsella rubella
Carub.0008s2849 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13314122-13319121 Capsella rubella
Carub.0008s2849 5.0kb downstream 5.0kb downstream 8735 true scaffold_8: 13319122-13327856 Capsella rubella
Carub.0008s2849 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13322857-13327856 Capsella rubella
Carub.0008s2849 10.0kb upstream 10.0kb upstream 13735 true scaffold_8: 13309122-13322856 Capsella rubella
Carub.0008s2849 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13309122-13319121 Capsella rubella
Carub.0008s2849 10.0kb downstream 10.0kb downstream 13735 true scaffold_8: 13319122-13332856 Capsella rubella
Carub.0008s2849 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13322857-13332856 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376117 5261 Brassicaceae View MSA
123828423 5264 Brassicales-Malvales View MSA
124343568 5266 SBM View MSA
124242227 5268 Malvidae View MSA
124069154 5270 Rosid View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain