Gene : Carub.0008s2859 C. rubella v1.1
Defline:  (1 of 9) K05605 - 3-hydroxyisobutyryl-CoA hydrolase (HIBCH) Genomic Order:  2859
Name:  ? Carub.0008s2859 Secondary Identifier:  ? PAC:39252330
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7574 Capsella rubella pathologic  
Crubella VALDEG-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2859 0.5kb upstream 0.5kb upstream 3496 true scaffold_8: 13351434-13354929 Capsella rubella
Carub.0008s2859 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13351434-13351933 Capsella rubella
Carub.0008s2859 0.5kb downstream 0.5kb downstream 3496 true scaffold_8: 13351934-13355429 Capsella rubella
Carub.0008s2859 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13354930-13355429 Capsella rubella
Carub.0008s2859 1.0kb upstream 1.0kb upstream 3996 true scaffold_8: 13350934-13354929 Capsella rubella
Carub.0008s2859 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13350934-13351933 Capsella rubella
Carub.0008s2859 1.0kb downstream 1.0kb downstream 3996 true scaffold_8: 13351934-13355929 Capsella rubella
Carub.0008s2859 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13354930-13355929 Capsella rubella
Carub.0008s2859 2.0kb upstream 2.0kb upstream 4996 true scaffold_8: 13349934-13354929 Capsella rubella
Carub.0008s2859 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13349934-13351933 Capsella rubella
Carub.0008s2859 2.0kb downstream 2.0kb downstream 4996 true scaffold_8: 13351934-13356929 Capsella rubella
Carub.0008s2859 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13354930-13356929 Capsella rubella
Carub.0008s2859 5.0kb upstream 5.0kb upstream 7996 true scaffold_8: 13346934-13354929 Capsella rubella
Carub.0008s2859 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13346934-13351933 Capsella rubella
Carub.0008s2859 5.0kb downstream 5.0kb downstream 7996 true scaffold_8: 13351934-13359929 Capsella rubella
Carub.0008s2859 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13354930-13359929 Capsella rubella
Carub.0008s2859 10.0kb upstream 10.0kb upstream 12996 true scaffold_8: 13341934-13354929 Capsella rubella
Carub.0008s2859 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13341934-13351933 Capsella rubella
Carub.0008s2859 10.0kb downstream 10.0kb downstream 10585 true scaffold_8: 13351934-13362518 Capsella rubella
Carub.0008s2859 10.0kb downstream 10.0kb downstream 7589 false scaffold_8: 13354930-13362518 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369641 5261 Brassicaceae View MSA
123838723 5264 Brassicales-Malvales View MSA
124343848 5266 SBM View MSA
124242681 5268 Malvidae View MSA
124073878 5270 Rosid View MSA
123743362 5271 Pentapetalae View MSA
122792177 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain