Gene : Carub.0008s2780 C. rubella v1.1
Defline:  (1 of 3) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Genomic Order:  2780
Name:  ? Carub.0008s2780 Secondary Identifier:  ? PAC:39251640
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2780 0.5kb upstream 0.5kb upstream 1862 true scaffold_8: 13080019-13081880 Capsella rubella
Carub.0008s2780 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13081381-13081880 Capsella rubella
Carub.0008s2780 0.5kb downstream 0.5kb downstream 1862 true scaffold_8: 13079519-13081380 Capsella rubella
Carub.0008s2780 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13079519-13080018 Capsella rubella
Carub.0008s2780 1.0kb upstream 1.0kb upstream 2362 true scaffold_8: 13080019-13082380 Capsella rubella
Carub.0008s2780 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13081381-13082380 Capsella rubella
Carub.0008s2780 1.0kb downstream 1.0kb downstream 2362 true scaffold_8: 13079019-13081380 Capsella rubella
Carub.0008s2780 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13079019-13080018 Capsella rubella
Carub.0008s2780 2.0kb upstream 2.0kb upstream 3362 true scaffold_8: 13080019-13083380 Capsella rubella
Carub.0008s2780 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13081381-13083380 Capsella rubella
Carub.0008s2780 2.0kb downstream 2.0kb downstream 3362 true scaffold_8: 13078019-13081380 Capsella rubella
Carub.0008s2780 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13078019-13080018 Capsella rubella
Carub.0008s2780 5.0kb upstream 5.0kb upstream 6362 true scaffold_8: 13080019-13086380 Capsella rubella
Carub.0008s2780 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13081381-13086380 Capsella rubella
Carub.0008s2780 5.0kb downstream 5.0kb downstream 6362 true scaffold_8: 13075019-13081380 Capsella rubella
Carub.0008s2780 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13075019-13080018 Capsella rubella
Carub.0008s2780 10.0kb upstream 10.0kb upstream 11362 true scaffold_8: 13080019-13091380 Capsella rubella
Carub.0008s2780 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13081381-13091380 Capsella rubella
Carub.0008s2780 10.0kb downstream 10.0kb downstream 11362 true scaffold_8: 13070019-13081380 Capsella rubella
Carub.0008s2780 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13070019-13080018 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370323 5261 Brassicaceae View MSA
123842409 5264 Brassicales-Malvales View MSA
124323470 5266 SBM View MSA
124253261 5268 Malvidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain