Gene : Carub.0008s2552 C. rubella v1.1
Defline:  (1 of 2) PTHR14379//PTHR14379:SF6 - LIMKAIN B LKAP // EMB|CAB71880.1 Genomic Order:  2552
Name:  ? Carub.0008s2552 Secondary Identifier:  ? PAC:39250708
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2552 0.5kb upstream 0.5kb upstream 3519 true scaffold_8: 12243472-12246990 Capsella rubella
Carub.0008s2552 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12243472-12243971 Capsella rubella
Carub.0008s2552 0.5kb downstream 0.5kb downstream 3519 true scaffold_8: 12243972-12247490 Capsella rubella
Carub.0008s2552 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12246991-12247490 Capsella rubella
Carub.0008s2552 1.0kb upstream 1.0kb upstream 4019 true scaffold_8: 12242972-12246990 Capsella rubella
Carub.0008s2552 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12242972-12243971 Capsella rubella
Carub.0008s2552 1.0kb downstream 1.0kb downstream 4019 true scaffold_8: 12243972-12247990 Capsella rubella
Carub.0008s2552 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12246991-12247990 Capsella rubella
Carub.0008s2552 2.0kb upstream 2.0kb upstream 5019 true scaffold_8: 12241972-12246990 Capsella rubella
Carub.0008s2552 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12241972-12243971 Capsella rubella
Carub.0008s2552 2.0kb downstream 2.0kb downstream 5019 true scaffold_8: 12243972-12248990 Capsella rubella
Carub.0008s2552 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12246991-12248990 Capsella rubella
Carub.0008s2552 5.0kb upstream 5.0kb upstream 8019 true scaffold_8: 12238972-12246990 Capsella rubella
Carub.0008s2552 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12238972-12243971 Capsella rubella
Carub.0008s2552 5.0kb downstream 5.0kb downstream 8019 true scaffold_8: 12243972-12251990 Capsella rubella
Carub.0008s2552 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12246991-12251990 Capsella rubella
Carub.0008s2552 10.0kb upstream 10.0kb upstream 13019 true scaffold_8: 12233972-12246990 Capsella rubella
Carub.0008s2552 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12233972-12243971 Capsella rubella
Carub.0008s2552 10.0kb downstream 10.0kb downstream 13019 true scaffold_8: 12243972-12256990 Capsella rubella
Carub.0008s2552 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12246991-12256990 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376210 5261 Brassicaceae View MSA
123801179 5264 Brassicales-Malvales View MSA
124298512 5266 SBM View MSA
124252056 5268 Malvidae View MSA
124065128 5270 Rosid View MSA
123747912 5271 Pentapetalae View MSA
122785708 5272 Eudicot View MSA
122049513 5273 Angiosperm View MSA
121311448 5274 Embryophyte View MSA
123348743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain