Gene : Carub.0008s2600 C. rubella v1.1
Defline:  (1 of 2) PTHR22904//PTHR22904:SF358 - TPR REPEAT CONTAINING PROTEIN // CC-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  2600
Name:  ? Carub.0008s2600 Secondary Identifier:  ? PAC:39251678
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2600 0.5kb upstream 0.5kb upstream 3145 true scaffold_8: 12403332-12406476 Capsella rubella
Carub.0008s2600 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12405977-12406476 Capsella rubella
Carub.0008s2600 0.5kb downstream 0.5kb downstream 3145 true scaffold_8: 12402832-12405976 Capsella rubella
Carub.0008s2600 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12402832-12403331 Capsella rubella
Carub.0008s2600 1.0kb upstream 1.0kb upstream 3645 true scaffold_8: 12403332-12406976 Capsella rubella
Carub.0008s2600 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12405977-12406976 Capsella rubella
Carub.0008s2600 1.0kb downstream 1.0kb downstream 3645 true scaffold_8: 12402332-12405976 Capsella rubella
Carub.0008s2600 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12402332-12403331 Capsella rubella
Carub.0008s2600 2.0kb upstream 2.0kb upstream 4645 true scaffold_8: 12403332-12407976 Capsella rubella
Carub.0008s2600 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12405977-12407976 Capsella rubella
Carub.0008s2600 2.0kb downstream 2.0kb downstream 4645 true scaffold_8: 12401332-12405976 Capsella rubella
Carub.0008s2600 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12401332-12403331 Capsella rubella
Carub.0008s2600 5.0kb upstream 5.0kb upstream 7645 true scaffold_8: 12403332-12410976 Capsella rubella
Carub.0008s2600 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12405977-12410976 Capsella rubella
Carub.0008s2600 5.0kb downstream 5.0kb downstream 7645 true scaffold_8: 12398332-12405976 Capsella rubella
Carub.0008s2600 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12398332-12403331 Capsella rubella
Carub.0008s2600 10.0kb upstream 10.0kb upstream 12645 true scaffold_8: 12403332-12415976 Capsella rubella
Carub.0008s2600 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12405977-12415976 Capsella rubella
Carub.0008s2600 10.0kb downstream 10.0kb downstream 12645 true scaffold_8: 12393332-12405976 Capsella rubella
Carub.0008s2600 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12393332-12403331 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364740 5261 Brassicaceae View MSA
123838346 5264 Brassicales-Malvales View MSA
124343835 5266 SBM View MSA
124254049 5268 Malvidae View MSA
124063288 5270 Rosid View MSA
123737789 5271 Pentapetalae View MSA
122790297 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain