Gene : Carub.0008s2595 C. rubella v1.1
Defline:  (1 of 1) PTHR10909:SF317 - ACYL-COENZYME A OXIDASE 2, PEROXISOMAL Genomic Order:  2595
Name:  ? Carub.0008s2595 Secondary Identifier:  ? PAC:39251232
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5136 Capsella rubella pathologic  
Crubella PWY-561 Capsella rubella pathologic  
Crubella PWY-6837 Capsella rubella pathologic  
Crubella PWY-735 Capsella rubella pathologic  
Crubella PWY-7606 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2595 0.5kb upstream 0.5kb upstream 3485 true scaffold_8: 12381107-12384591 Capsella rubella
Carub.0008s2595 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12384092-12384591 Capsella rubella
Carub.0008s2595 0.5kb downstream 0.5kb downstream 3485 true scaffold_8: 12380607-12384091 Capsella rubella
Carub.0008s2595 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12380607-12381106 Capsella rubella
Carub.0008s2595 1.0kb upstream 1.0kb upstream 3985 true scaffold_8: 12381107-12385091 Capsella rubella
Carub.0008s2595 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12384092-12385091 Capsella rubella
Carub.0008s2595 1.0kb downstream 1.0kb downstream 3985 true scaffold_8: 12380107-12384091 Capsella rubella
Carub.0008s2595 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12380107-12381106 Capsella rubella
Carub.0008s2595 2.0kb upstream 2.0kb upstream 4985 true scaffold_8: 12381107-12386091 Capsella rubella
Carub.0008s2595 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12384092-12386091 Capsella rubella
Carub.0008s2595 2.0kb downstream 2.0kb downstream 4985 true scaffold_8: 12379107-12384091 Capsella rubella
Carub.0008s2595 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12379107-12381106 Capsella rubella
Carub.0008s2595 5.0kb upstream 5.0kb upstream 7985 true scaffold_8: 12381107-12389091 Capsella rubella
Carub.0008s2595 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12384092-12389091 Capsella rubella
Carub.0008s2595 5.0kb downstream 5.0kb downstream 7985 true scaffold_8: 12376107-12384091 Capsella rubella
Carub.0008s2595 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12376107-12381106 Capsella rubella
Carub.0008s2595 10.0kb upstream 10.0kb upstream 12985 true scaffold_8: 12381107-12394091 Capsella rubella
Carub.0008s2595 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12384092-12394091 Capsella rubella
Carub.0008s2595 10.0kb downstream 10.0kb downstream 12985 true scaffold_8: 12371107-12384091 Capsella rubella
Carub.0008s2595 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12371107-12381106 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372948 5261 Brassicaceae View MSA
123829963 5264 Brassicales-Malvales View MSA
124350402 5266 SBM View MSA
124242790 5268 Malvidae View MSA
124061982 5270 Rosid View MSA
123753780 5271 Pentapetalae View MSA
122787775 5272 Eudicot View MSA
122044984 5273 Angiosperm View MSA
121345610 5274 Embryophyte View MSA
123428252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain