Gene : Carub.0008s2621 C. rubella v1.1
Defline:  (1 of 9) PTHR11945//PTHR11945:SF240 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN-RELATED Genomic Order:  2621
Name:  ? Carub.0008s2621 Secondary Identifier:  ? PAC:39250254
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2621 0.5kb upstream 0.5kb upstream 2077 true scaffold_8: 12481130-12483206 Capsella rubella
Carub.0008s2621 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12481130-12481629 Capsella rubella
Carub.0008s2621 0.5kb downstream 0.5kb downstream 2077 true scaffold_8: 12481630-12483706 Capsella rubella
Carub.0008s2621 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12483207-12483706 Capsella rubella
Carub.0008s2621 1.0kb upstream 1.0kb upstream 2577 true scaffold_8: 12480630-12483206 Capsella rubella
Carub.0008s2621 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12480630-12481629 Capsella rubella
Carub.0008s2621 1.0kb downstream 1.0kb downstream 2577 true scaffold_8: 12481630-12484206 Capsella rubella
Carub.0008s2621 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12483207-12484206 Capsella rubella
Carub.0008s2621 2.0kb upstream 2.0kb upstream 3577 true scaffold_8: 12479630-12483206 Capsella rubella
Carub.0008s2621 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12479630-12481629 Capsella rubella
Carub.0008s2621 2.0kb downstream 2.0kb downstream 3577 true scaffold_8: 12481630-12485206 Capsella rubella
Carub.0008s2621 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12483207-12485206 Capsella rubella
Carub.0008s2621 5.0kb upstream 5.0kb upstream 6577 true scaffold_8: 12476630-12483206 Capsella rubella
Carub.0008s2621 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12476630-12481629 Capsella rubella
Carub.0008s2621 5.0kb downstream 5.0kb downstream 6577 true scaffold_8: 12481630-12488206 Capsella rubella
Carub.0008s2621 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12483207-12488206 Capsella rubella
Carub.0008s2621 10.0kb upstream 10.0kb upstream 11577 true scaffold_8: 12471630-12483206 Capsella rubella
Carub.0008s2621 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12471630-12481629 Capsella rubella
Carub.0008s2621 10.0kb downstream 10.0kb downstream 11577 true scaffold_8: 12481630-12493206 Capsella rubella
Carub.0008s2621 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12483207-12493206 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337021 5261 Brassicaceae Singleton cluster - no MSA
123777702 5264 Brassicales-Malvales Singleton cluster - no MSA
124276064 5266 SBM Singleton cluster - no MSA
124252728 5268 Malvidae View MSA
124074162 5270 Rosid View MSA
123746234 5271 Pentapetalae View MSA
122797377 5272 Eudicot View MSA
122048647 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain