Gene : Carub.0008s2401 C. rubella v1.1
Defline:  (1 of 4) PTHR12506//PTHR12506:SF20 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43 Genomic Order:  2401
Name:  ? Carub.0008s2401 Secondary Identifier:  ? PAC:39251220
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2401 0.5kb upstream 0.5kb upstream 3674 true scaffold_8: 11702814-11706487 Capsella rubella
Carub.0008s2401 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11702814-11703313 Capsella rubella
Carub.0008s2401 0.5kb downstream 0.5kb downstream 3674 true scaffold_8: 11703314-11706987 Capsella rubella
Carub.0008s2401 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11706488-11706987 Capsella rubella
Carub.0008s2401 1.0kb upstream 1.0kb upstream 4174 true scaffold_8: 11702314-11706487 Capsella rubella
Carub.0008s2401 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11702314-11703313 Capsella rubella
Carub.0008s2401 1.0kb downstream 1.0kb downstream 4174 true scaffold_8: 11703314-11707487 Capsella rubella
Carub.0008s2401 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11706488-11707487 Capsella rubella
Carub.0008s2401 2.0kb upstream 2.0kb upstream 5174 true scaffold_8: 11701314-11706487 Capsella rubella
Carub.0008s2401 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11701314-11703313 Capsella rubella
Carub.0008s2401 2.0kb downstream 2.0kb downstream 5174 true scaffold_8: 11703314-11708487 Capsella rubella
Carub.0008s2401 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11706488-11708487 Capsella rubella
Carub.0008s2401 5.0kb upstream 5.0kb upstream 8174 true scaffold_8: 11698314-11706487 Capsella rubella
Carub.0008s2401 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11698314-11703313 Capsella rubella
Carub.0008s2401 5.0kb downstream 5.0kb downstream 8174 true scaffold_8: 11703314-11711487 Capsella rubella
Carub.0008s2401 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11706488-11711487 Capsella rubella
Carub.0008s2401 10.0kb upstream 10.0kb upstream 13174 true scaffold_8: 11693314-11706487 Capsella rubella
Carub.0008s2401 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11693314-11703313 Capsella rubella
Carub.0008s2401 10.0kb downstream 10.0kb downstream 13174 true scaffold_8: 11703314-11716487 Capsella rubella
Carub.0008s2401 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11706488-11716487 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371431 5261 Brassicaceae View MSA
123837670 5264 Brassicales-Malvales View MSA
124339834 5266 SBM View MSA
124242397 5268 Malvidae View MSA
124063047 5270 Rosid View MSA
123746859 5271 Pentapetalae View MSA
122797489 5272 Eudicot View MSA
122049599 5273 Angiosperm View MSA
121311496 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain