Gene : Carub.0008s2715 C. rubella v1.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF119 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  2715
Name:  ? Carub.0008s2715 Secondary Identifier:  ? PAC:39253003
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2715 0.5kb upstream 0.5kb upstream 3857 true scaffold_8: 12849142-12852998 Capsella rubella
Carub.0008s2715 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12852499-12852998 Capsella rubella
Carub.0008s2715 0.5kb downstream 0.5kb downstream 3857 true scaffold_8: 12848642-12852498 Capsella rubella
Carub.0008s2715 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12848642-12849141 Capsella rubella
Carub.0008s2715 1.0kb upstream 1.0kb upstream 4357 true scaffold_8: 12849142-12853498 Capsella rubella
Carub.0008s2715 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12852499-12853498 Capsella rubella
Carub.0008s2715 1.0kb downstream 1.0kb downstream 4357 true scaffold_8: 12848142-12852498 Capsella rubella
Carub.0008s2715 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12848142-12849141 Capsella rubella
Carub.0008s2715 2.0kb upstream 2.0kb upstream 5357 true scaffold_8: 12849142-12854498 Capsella rubella
Carub.0008s2715 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12852499-12854498 Capsella rubella
Carub.0008s2715 2.0kb downstream 2.0kb downstream 5357 true scaffold_8: 12847142-12852498 Capsella rubella
Carub.0008s2715 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12847142-12849141 Capsella rubella
Carub.0008s2715 5.0kb upstream 5.0kb upstream 8357 true scaffold_8: 12849142-12857498 Capsella rubella
Carub.0008s2715 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12852499-12857498 Capsella rubella
Carub.0008s2715 5.0kb downstream 5.0kb downstream 8357 true scaffold_8: 12844142-12852498 Capsella rubella
Carub.0008s2715 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12844142-12849141 Capsella rubella
Carub.0008s2715 10.0kb upstream 10.0kb upstream 13357 true scaffold_8: 12849142-12862498 Capsella rubella
Carub.0008s2715 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12852499-12862498 Capsella rubella
Carub.0008s2715 10.0kb downstream 10.0kb downstream 13357 true scaffold_8: 12839142-12852498 Capsella rubella
Carub.0008s2715 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12839142-12849141 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365114 5261 Brassicaceae View MSA
123798893 5264 Brassicales-Malvales View MSA
124296469 5266 SBM View MSA
124250310 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain