Gene : Carub.0008s2729 C. rubella v1.1
Defline:  (1 of 1) 1.3.1.88 - tRNA-dihydrouridine(16/17) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 1 Genomic Order:  2729
Name:  ? Carub.0008s2729 Secondary Identifier:  ? PAC:39252639
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2729 0.5kb upstream 0.5kb upstream 2217 true scaffold_8: 12898280-12900496 Capsella rubella
Carub.0008s2729 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12898280-12898779 Capsella rubella
Carub.0008s2729 0.5kb downstream 0.5kb downstream 2217 true scaffold_8: 12898780-12900996 Capsella rubella
Carub.0008s2729 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12900497-12900996 Capsella rubella
Carub.0008s2729 1.0kb upstream 1.0kb upstream 2717 true scaffold_8: 12897780-12900496 Capsella rubella
Carub.0008s2729 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12897780-12898779 Capsella rubella
Carub.0008s2729 1.0kb downstream 1.0kb downstream 2717 true scaffold_8: 12898780-12901496 Capsella rubella
Carub.0008s2729 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12900497-12901496 Capsella rubella
Carub.0008s2729 2.0kb upstream 2.0kb upstream 3717 true scaffold_8: 12896780-12900496 Capsella rubella
Carub.0008s2729 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12896780-12898779 Capsella rubella
Carub.0008s2729 2.0kb downstream 2.0kb downstream 3717 true scaffold_8: 12898780-12902496 Capsella rubella
Carub.0008s2729 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12900497-12902496 Capsella rubella
Carub.0008s2729 5.0kb upstream 5.0kb upstream 6717 true scaffold_8: 12893780-12900496 Capsella rubella
Carub.0008s2729 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12893780-12898779 Capsella rubella
Carub.0008s2729 5.0kb downstream 5.0kb downstream 6717 true scaffold_8: 12898780-12905496 Capsella rubella
Carub.0008s2729 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12900497-12905496 Capsella rubella
Carub.0008s2729 10.0kb upstream 10.0kb upstream 11717 true scaffold_8: 12888780-12900496 Capsella rubella
Carub.0008s2729 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12888780-12898779 Capsella rubella
Carub.0008s2729 10.0kb downstream 10.0kb downstream 11717 true scaffold_8: 12898780-12910496 Capsella rubella
Carub.0008s2729 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12900497-12910496 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369826 5261 Brassicaceae View MSA
123831514 5264 Brassicales-Malvales View MSA
124343758 5266 SBM View MSA
124241457 5268 Malvidae View MSA
124062758 5270 Rosid View MSA
123738854 5271 Pentapetalae View MSA
122785939 5272 Eudicot View MSA
122041890 5273 Angiosperm View MSA
121349502 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain