Gene : Carub.0008s2500 C. rubella v1.1
Defline:  (1 of 1) PTHR31803//PTHR31803:SF6 - FAMILY NOT NAMED // UBIQUINOL OXIDASE 2, MITOCHONDRIAL Genomic Order:  2500
Name:  ? Carub.0008s2500 Secondary Identifier:  ? PAC:39252615
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4302 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2500 0.5kb upstream 0.5kb upstream 2203 true scaffold_8: 12051191-12053393 Capsella rubella
Carub.0008s2500 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12052894-12053393 Capsella rubella
Carub.0008s2500 0.5kb downstream 0.5kb downstream 2203 true scaffold_8: 12050691-12052893 Capsella rubella
Carub.0008s2500 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12050691-12051190 Capsella rubella
Carub.0008s2500 1.0kb upstream 1.0kb upstream 2703 true scaffold_8: 12051191-12053893 Capsella rubella
Carub.0008s2500 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12052894-12053893 Capsella rubella
Carub.0008s2500 1.0kb downstream 1.0kb downstream 2703 true scaffold_8: 12050191-12052893 Capsella rubella
Carub.0008s2500 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12050191-12051190 Capsella rubella
Carub.0008s2500 2.0kb upstream 2.0kb upstream 3703 true scaffold_8: 12051191-12054893 Capsella rubella
Carub.0008s2500 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12052894-12054893 Capsella rubella
Carub.0008s2500 2.0kb downstream 2.0kb downstream 3703 true scaffold_8: 12049191-12052893 Capsella rubella
Carub.0008s2500 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12049191-12051190 Capsella rubella
Carub.0008s2500 5.0kb upstream 5.0kb upstream 6703 true scaffold_8: 12051191-12057893 Capsella rubella
Carub.0008s2500 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12052894-12057893 Capsella rubella
Carub.0008s2500 5.0kb downstream 5.0kb downstream 6703 true scaffold_8: 12046191-12052893 Capsella rubella
Carub.0008s2500 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12046191-12051190 Capsella rubella
Carub.0008s2500 10.0kb upstream 10.0kb upstream 11703 true scaffold_8: 12051191-12062893 Capsella rubella
Carub.0008s2500 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12052894-12062893 Capsella rubella
Carub.0008s2500 10.0kb downstream 10.0kb downstream 11703 true scaffold_8: 12041191-12052893 Capsella rubella
Carub.0008s2500 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12041191-12051190 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378465 5261 Brassicaceae View MSA
123836828 5264 Brassicales-Malvales View MSA
124346827 5266 SBM View MSA
124246674 5268 Malvidae View MSA
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain