Gene : Carub.0008s2517 C. rubella v1.1
Defline:  (1 of 1) 3.5.1.6 - Beta-ureidopropionase Genomic Order:  2517
Name:  ? Carub.0008s2517 Secondary Identifier:  ? PAC:39253018
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3982 Capsella rubella pathologic  
Crubella PWY-6430 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2517 0.5kb upstream 0.5kb upstream 2422 true scaffold_8: 12106212-12108633 Capsella rubella
Carub.0008s2517 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12106212-12106711 Capsella rubella
Carub.0008s2517 0.5kb downstream 0.5kb downstream 2422 true scaffold_8: 12106712-12109133 Capsella rubella
Carub.0008s2517 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12108634-12109133 Capsella rubella
Carub.0008s2517 1.0kb upstream 1.0kb upstream 2922 true scaffold_8: 12105712-12108633 Capsella rubella
Carub.0008s2517 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12105712-12106711 Capsella rubella
Carub.0008s2517 1.0kb downstream 1.0kb downstream 2922 true scaffold_8: 12106712-12109633 Capsella rubella
Carub.0008s2517 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12108634-12109633 Capsella rubella
Carub.0008s2517 2.0kb upstream 2.0kb upstream 3922 true scaffold_8: 12104712-12108633 Capsella rubella
Carub.0008s2517 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12104712-12106711 Capsella rubella
Carub.0008s2517 2.0kb downstream 2.0kb downstream 3922 true scaffold_8: 12106712-12110633 Capsella rubella
Carub.0008s2517 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12108634-12110633 Capsella rubella
Carub.0008s2517 5.0kb upstream 5.0kb upstream 6922 true scaffold_8: 12101712-12108633 Capsella rubella
Carub.0008s2517 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12101712-12106711 Capsella rubella
Carub.0008s2517 5.0kb downstream 5.0kb downstream 6922 true scaffold_8: 12106712-12113633 Capsella rubella
Carub.0008s2517 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12108634-12113633 Capsella rubella
Carub.0008s2517 10.0kb upstream 10.0kb upstream 11922 true scaffold_8: 12096712-12108633 Capsella rubella
Carub.0008s2517 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12096712-12106711 Capsella rubella
Carub.0008s2517 10.0kb downstream 10.0kb downstream 11922 true scaffold_8: 12106712-12118633 Capsella rubella
Carub.0008s2517 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12108634-12118633 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364863 5261 Brassicaceae View MSA
123839768 5264 Brassicales-Malvales View MSA
124343031 5266 SBM View MSA
124241093 5268 Malvidae View MSA
124062132 5270 Rosid View MSA
123750342 5271 Pentapetalae View MSA
122790963 5272 Eudicot View MSA
122045387 5273 Angiosperm View MSA
121345215 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain