Gene : Carub.0008s2512 C. rubella v1.1
Defline:  (1 of 1) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  2512
Name:  ? Carub.0008s2512 Secondary Identifier:  ? PAC:39251973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2512 0.5kb upstream 0.5kb upstream 3767 true scaffold_8: 12093690-12097456 Capsella rubella
Carub.0008s2512 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12093690-12094189 Capsella rubella
Carub.0008s2512 0.5kb downstream 0.5kb downstream 3767 true scaffold_8: 12094190-12097956 Capsella rubella
Carub.0008s2512 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12097457-12097956 Capsella rubella
Carub.0008s2512 1.0kb upstream 1.0kb upstream 4267 true scaffold_8: 12093190-12097456 Capsella rubella
Carub.0008s2512 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12093190-12094189 Capsella rubella
Carub.0008s2512 1.0kb downstream 1.0kb downstream 4267 true scaffold_8: 12094190-12098456 Capsella rubella
Carub.0008s2512 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12097457-12098456 Capsella rubella
Carub.0008s2512 2.0kb upstream 2.0kb upstream 5267 true scaffold_8: 12092190-12097456 Capsella rubella
Carub.0008s2512 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12092190-12094189 Capsella rubella
Carub.0008s2512 2.0kb downstream 2.0kb downstream 5267 true scaffold_8: 12094190-12099456 Capsella rubella
Carub.0008s2512 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12097457-12099456 Capsella rubella
Carub.0008s2512 5.0kb upstream 5.0kb upstream 8267 true scaffold_8: 12089190-12097456 Capsella rubella
Carub.0008s2512 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12089190-12094189 Capsella rubella
Carub.0008s2512 5.0kb downstream 5.0kb downstream 8267 true scaffold_8: 12094190-12102456 Capsella rubella
Carub.0008s2512 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12097457-12102456 Capsella rubella
Carub.0008s2512 10.0kb upstream 10.0kb upstream 13267 true scaffold_8: 12084190-12097456 Capsella rubella
Carub.0008s2512 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12084190-12094189 Capsella rubella
Carub.0008s2512 10.0kb downstream 10.0kb downstream 13267 true scaffold_8: 12094190-12107456 Capsella rubella
Carub.0008s2512 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12097457-12107456 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362053 5261 Brassicaceae View MSA
123832036 5264 Brassicales-Malvales View MSA
124338450 5266 SBM View MSA
124247205 5268 Malvidae View MSA
124063481 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain