Gene : Carub.0008s2516 C. rubella v1.1

Defline:  (1 of 1) PTHR24078//PTHR24078:SF316 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  2516
Name:  ? Carub.0008s2516 Secondary Identifier:  ? PAC:39252372

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2516 0.5kb upstream 0.5kb upstream 3099 true scaffold_8: 12103723-12106821 Capsella rubella
Carub.0008s2516 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12106322-12106821 Capsella rubella
Carub.0008s2516 0.5kb downstream 0.5kb downstream 3099 true scaffold_8: 12103223-12106321 Capsella rubella
Carub.0008s2516 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12103223-12103722 Capsella rubella
Carub.0008s2516 1.0kb upstream 1.0kb upstream 3599 true scaffold_8: 12103723-12107321 Capsella rubella
Carub.0008s2516 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12106322-12107321 Capsella rubella
Carub.0008s2516 1.0kb downstream 1.0kb downstream 3599 true scaffold_8: 12102723-12106321 Capsella rubella
Carub.0008s2516 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12102723-12103722 Capsella rubella
Carub.0008s2516 2.0kb upstream 2.0kb upstream 4599 true scaffold_8: 12103723-12108321 Capsella rubella
Carub.0008s2516 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12106322-12108321 Capsella rubella
Carub.0008s2516 2.0kb downstream 2.0kb downstream 4599 true scaffold_8: 12101723-12106321 Capsella rubella
Carub.0008s2516 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12101723-12103722 Capsella rubella
Carub.0008s2516 5.0kb upstream 5.0kb upstream 7599 true scaffold_8: 12103723-12111321 Capsella rubella
Carub.0008s2516 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12106322-12111321 Capsella rubella
Carub.0008s2516 5.0kb downstream 5.0kb downstream 7599 true scaffold_8: 12098723-12106321 Capsella rubella
Carub.0008s2516 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12098723-12103722 Capsella rubella
Carub.0008s2516 10.0kb upstream 10.0kb upstream 12599 true scaffold_8: 12103723-12116321 Capsella rubella
Carub.0008s2516 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12106322-12116321 Capsella rubella
Carub.0008s2516 10.0kb downstream 10.0kb downstream 12599 true scaffold_8: 12093723-12106321 Capsella rubella
Carub.0008s2516 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12093723-12103722 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361680 5261 Brassicaceae View MSA
123798222 5264 Brassicales-Malvales View MSA
124340877 5266 SBM View MSA
124253304 5268 Malvidae View MSA
124074016 5270 Rosid View MSA
123741579 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain