Gene : Carub.0008s1921 C. rubella v1.1

Defline:  (1 of 3) K15306 - Ran-binding protein 1 (RANBP1) Genomic Order:  1921
Name:  ? Carub.0008s1921 Secondary Identifier:  ? PAC:39252621

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1921 0.5kb upstream 0.5kb upstream 2227 true scaffold_8: 9884270-9886496 Capsella rubella
Carub.0008s1921 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9885997-9886496 Capsella rubella
Carub.0008s1921 0.5kb downstream 0.5kb downstream 2227 true scaffold_8: 9883770-9885996 Capsella rubella
Carub.0008s1921 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9883770-9884269 Capsella rubella
Carub.0008s1921 1.0kb upstream 1.0kb upstream 2727 true scaffold_8: 9884270-9886996 Capsella rubella
Carub.0008s1921 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9885997-9886996 Capsella rubella
Carub.0008s1921 1.0kb downstream 1.0kb downstream 2727 true scaffold_8: 9883270-9885996 Capsella rubella
Carub.0008s1921 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9883270-9884269 Capsella rubella
Carub.0008s1921 2.0kb upstream 2.0kb upstream 3727 true scaffold_8: 9884270-9887996 Capsella rubella
Carub.0008s1921 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9885997-9887996 Capsella rubella
Carub.0008s1921 2.0kb downstream 2.0kb downstream 3727 true scaffold_8: 9882270-9885996 Capsella rubella
Carub.0008s1921 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9882270-9884269 Capsella rubella
Carub.0008s1921 5.0kb upstream 5.0kb upstream 6727 true scaffold_8: 9884270-9890996 Capsella rubella
Carub.0008s1921 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9885997-9890996 Capsella rubella
Carub.0008s1921 5.0kb downstream 5.0kb downstream 6727 true scaffold_8: 9879270-9885996 Capsella rubella
Carub.0008s1921 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9879270-9884269 Capsella rubella
Carub.0008s1921 10.0kb upstream 10.0kb upstream 11727 true scaffold_8: 9884270-9895996 Capsella rubella
Carub.0008s1921 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9885997-9895996 Capsella rubella
Carub.0008s1921 10.0kb downstream 10.0kb downstream 11727 true scaffold_8: 9874270-9885996 Capsella rubella
Carub.0008s1921 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9874270-9884269 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377615 5261 Brassicaceae View MSA
123801582 5264 Brassicales-Malvales View MSA
124298865 5266 SBM View MSA
124248716 5268 Malvidae View MSA
124061398 5270 Rosid View MSA
123750173 5271 Pentapetalae View MSA
122790979 5272 Eudicot View MSA
122044906 5273 Angiosperm View MSA
121343818 5274 Embryophyte View MSA
123427717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain