Gene : Carub.0008s1931 C. rubella v1.1
Defline:  (1 of 8) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Genomic Order:  1931
Name:  ? Carub.0008s1931 Secondary Identifier:  ? PAC:39250474
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPASYN-PWY Capsella rubella pathologic  
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6367 Capsella rubella pathologic  
Crubella PWY-7039 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1931 0.5kb upstream 0.5kb upstream 3820 true scaffold_8: 9915993-9919812 Capsella rubella
Carub.0008s1931 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9919313-9919812 Capsella rubella
Carub.0008s1931 0.5kb downstream 0.5kb downstream 3820 true scaffold_8: 9915493-9919312 Capsella rubella
Carub.0008s1931 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9915493-9915992 Capsella rubella
Carub.0008s1931 1.0kb upstream 1.0kb upstream 4320 true scaffold_8: 9915993-9920312 Capsella rubella
Carub.0008s1931 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9919313-9920312 Capsella rubella
Carub.0008s1931 1.0kb downstream 1.0kb downstream 4320 true scaffold_8: 9914993-9919312 Capsella rubella
Carub.0008s1931 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9914993-9915992 Capsella rubella
Carub.0008s1931 2.0kb upstream 2.0kb upstream 5320 true scaffold_8: 9915993-9921312 Capsella rubella
Carub.0008s1931 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9919313-9921312 Capsella rubella
Carub.0008s1931 2.0kb downstream 2.0kb downstream 5320 true scaffold_8: 9913993-9919312 Capsella rubella
Carub.0008s1931 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9913993-9915992 Capsella rubella
Carub.0008s1931 5.0kb upstream 5.0kb upstream 8320 true scaffold_8: 9915993-9924312 Capsella rubella
Carub.0008s1931 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9919313-9924312 Capsella rubella
Carub.0008s1931 5.0kb downstream 5.0kb downstream 8320 true scaffold_8: 9910993-9919312 Capsella rubella
Carub.0008s1931 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9910993-9915992 Capsella rubella
Carub.0008s1931 10.0kb upstream 10.0kb upstream 13320 true scaffold_8: 9915993-9929312 Capsella rubella
Carub.0008s1931 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9919313-9929312 Capsella rubella
Carub.0008s1931 10.0kb downstream 10.0kb downstream 13320 true scaffold_8: 9905993-9919312 Capsella rubella
Carub.0008s1931 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9905993-9915992 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579393 5273 Angiosperm View MSA
122375123 5261 Brassicaceae View MSA
123800885 5264 Brassicales-Malvales View MSA
124298245 5266 SBM View MSA
124250349 5268 Malvidae View MSA
123952492 5270 Rosid View MSA
123530260 5271 Pentapetalae View MSA
122565227 5272 Eudicot View MSA
120851856 5274 Embryophyte View MSA
122893022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain