Gene : Carub.0008s1930 C. rubella v1.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF64 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  1930
Name:  ? Carub.0008s1930 Secondary Identifier:  ? PAC:39250728
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1930 0.5kb upstream 0.5kb upstream 1565 true scaffold_8: 9914552-9916116 Capsella rubella
Carub.0008s1930 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9915617-9916116 Capsella rubella
Carub.0008s1930 0.5kb downstream 0.5kb downstream 1565 true scaffold_8: 9914052-9915616 Capsella rubella
Carub.0008s1930 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9914052-9914551 Capsella rubella
Carub.0008s1930 1.0kb upstream 1.0kb upstream 2065 true scaffold_8: 9914552-9916616 Capsella rubella
Carub.0008s1930 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9915617-9916616 Capsella rubella
Carub.0008s1930 1.0kb downstream 1.0kb downstream 2065 true scaffold_8: 9913552-9915616 Capsella rubella
Carub.0008s1930 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9913552-9914551 Capsella rubella
Carub.0008s1930 2.0kb upstream 2.0kb upstream 3065 true scaffold_8: 9914552-9917616 Capsella rubella
Carub.0008s1930 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9915617-9917616 Capsella rubella
Carub.0008s1930 2.0kb downstream 2.0kb downstream 3065 true scaffold_8: 9912552-9915616 Capsella rubella
Carub.0008s1930 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9912552-9914551 Capsella rubella
Carub.0008s1930 5.0kb upstream 5.0kb upstream 6065 true scaffold_8: 9914552-9920616 Capsella rubella
Carub.0008s1930 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9915617-9920616 Capsella rubella
Carub.0008s1930 5.0kb downstream 5.0kb downstream 6065 true scaffold_8: 9909552-9915616 Capsella rubella
Carub.0008s1930 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9909552-9914551 Capsella rubella
Carub.0008s1930 10.0kb upstream 10.0kb upstream 11065 true scaffold_8: 9914552-9925616 Capsella rubella
Carub.0008s1930 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9915617-9925616 Capsella rubella
Carub.0008s1930 10.0kb downstream 10.0kb downstream 11065 true scaffold_8: 9904552-9915616 Capsella rubella
Carub.0008s1930 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9904552-9914551 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343407 5261 Brassicaceae View MSA
123783620 5264 Brassicales-Malvales View MSA
124281841 5266 SBM View MSA
124136525 5268 Malvidae View MSA
123864371 5270 Rosid View MSA
123449688 5271 Pentapetalae View MSA
122485218 5272 Eudicot View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain