Gene : Carub.0002s2621 C. rubella v1.1
Defline:  (1 of 1) PTHR12706:SF13 - RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  2621
Name:  ? Carub.0002s2621 Secondary Identifier:  ? PAC:39244274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2621 0.5kb upstream 0.5kb upstream 9145 true scaffold_2: 13524567-13533711 Capsella rubella
Carub.0002s2621 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13533212-13533711 Capsella rubella
Carub.0002s2621 0.5kb downstream 0.5kb downstream 9145 true scaffold_2: 13524067-13533211 Capsella rubella
Carub.0002s2621 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13524067-13524566 Capsella rubella
Carub.0002s2621 1.0kb upstream 1.0kb upstream 9645 true scaffold_2: 13524567-13534211 Capsella rubella
Carub.0002s2621 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13533212-13534211 Capsella rubella
Carub.0002s2621 1.0kb downstream 1.0kb downstream 9645 true scaffold_2: 13523567-13533211 Capsella rubella
Carub.0002s2621 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13523567-13524566 Capsella rubella
Carub.0002s2621 2.0kb upstream 2.0kb upstream 10645 true scaffold_2: 13524567-13535211 Capsella rubella
Carub.0002s2621 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13533212-13535211 Capsella rubella
Carub.0002s2621 2.0kb downstream 2.0kb downstream 10645 true scaffold_2: 13522567-13533211 Capsella rubella
Carub.0002s2621 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13522567-13524566 Capsella rubella
Carub.0002s2621 5.0kb upstream 5.0kb upstream 13645 true scaffold_2: 13524567-13538211 Capsella rubella
Carub.0002s2621 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13533212-13538211 Capsella rubella
Carub.0002s2621 5.0kb downstream 5.0kb downstream 13645 true scaffold_2: 13519567-13533211 Capsella rubella
Carub.0002s2621 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13519567-13524566 Capsella rubella
Carub.0002s2621 10.0kb upstream 10.0kb upstream 18645 true scaffold_2: 13524567-13543211 Capsella rubella
Carub.0002s2621 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13533212-13543211 Capsella rubella
Carub.0002s2621 10.0kb downstream 10.0kb downstream 18645 true scaffold_2: 13514567-13533211 Capsella rubella
Carub.0002s2621 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13514567-13524566 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376620 5261 Brassicaceae View MSA
123829424 5264 Brassicales-Malvales View MSA
124347260 5266 SBM View MSA
124251905 5268 Malvidae View MSA
124065554 5270 Rosid View MSA
123742096 5271 Pentapetalae View MSA
122786510 5272 Eudicot View MSA
122045253 5273 Angiosperm View MSA
121344716 5274 Embryophyte View MSA
123424908 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain