Gene : Carub.0002s2628 C. rubella v1.1
Defline:  (1 of 9) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  2628
Name:  ? Carub.0002s2628 Secondary Identifier:  ? PAC:39244278
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2628 0.5kb upstream 0.5kb upstream 3306 true scaffold_2: 13553366-13556671 Capsella rubella
Carub.0002s2628 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13553366-13553865 Capsella rubella
Carub.0002s2628 0.5kb downstream 0.5kb downstream 3306 true scaffold_2: 13553866-13557171 Capsella rubella
Carub.0002s2628 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13556672-13557171 Capsella rubella
Carub.0002s2628 1.0kb upstream 1.0kb upstream 3806 true scaffold_2: 13552866-13556671 Capsella rubella
Carub.0002s2628 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13552866-13553865 Capsella rubella
Carub.0002s2628 1.0kb downstream 1.0kb downstream 3806 true scaffold_2: 13553866-13557671 Capsella rubella
Carub.0002s2628 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13556672-13557671 Capsella rubella
Carub.0002s2628 2.0kb upstream 2.0kb upstream 4806 true scaffold_2: 13551866-13556671 Capsella rubella
Carub.0002s2628 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13551866-13553865 Capsella rubella
Carub.0002s2628 2.0kb downstream 2.0kb downstream 4806 true scaffold_2: 13553866-13558671 Capsella rubella
Carub.0002s2628 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13556672-13558671 Capsella rubella
Carub.0002s2628 5.0kb upstream 5.0kb upstream 7806 true scaffold_2: 13548866-13556671 Capsella rubella
Carub.0002s2628 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13548866-13553865 Capsella rubella
Carub.0002s2628 5.0kb downstream 5.0kb downstream 7806 true scaffold_2: 13553866-13561671 Capsella rubella
Carub.0002s2628 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13556672-13561671 Capsella rubella
Carub.0002s2628 10.0kb upstream 10.0kb upstream 12806 true scaffold_2: 13543866-13556671 Capsella rubella
Carub.0002s2628 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13543866-13553865 Capsella rubella
Carub.0002s2628 10.0kb downstream 10.0kb downstream 12806 true scaffold_2: 13553866-13566671 Capsella rubella
Carub.0002s2628 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13556672-13566671 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363283 5261 Brassicaceae View MSA
123827344 5264 Brassicales-Malvales View MSA
124345467 5266 SBM View MSA
124242178 5268 Malvidae View MSA
124065577 5270 Rosid View MSA
123739517 5271 Pentapetalae View MSA
122769955 5272 Eudicot View MSA
122044240 5273 Angiosperm View MSA
121310259 5274 Embryophyte View MSA
123347798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain