Gene : Carub.0002s2646 C. rubella v1.1
Defline:  (1 of 1) PTHR31989:SF48 - PROTEIN SOMBRERO Genomic Order:  2646
Name:  ? Carub.0002s2646 Secondary Identifier:  ? PAC:39243881
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2646 0.5kb upstream 0.5kb upstream 2558 true scaffold_2: 13628228-13630785 Capsella rubella
Carub.0002s2646 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13630286-13630785 Capsella rubella
Carub.0002s2646 0.5kb downstream 0.5kb downstream 2558 true scaffold_2: 13627728-13630285 Capsella rubella
Carub.0002s2646 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13627728-13628227 Capsella rubella
Carub.0002s2646 1.0kb upstream 1.0kb upstream 3058 true scaffold_2: 13628228-13631285 Capsella rubella
Carub.0002s2646 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13630286-13631285 Capsella rubella
Carub.0002s2646 1.0kb downstream 1.0kb downstream 3058 true scaffold_2: 13627228-13630285 Capsella rubella
Carub.0002s2646 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13627228-13628227 Capsella rubella
Carub.0002s2646 2.0kb upstream 2.0kb upstream 4058 true scaffold_2: 13628228-13632285 Capsella rubella
Carub.0002s2646 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13630286-13632285 Capsella rubella
Carub.0002s2646 2.0kb downstream 2.0kb downstream 4058 true scaffold_2: 13626228-13630285 Capsella rubella
Carub.0002s2646 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13626228-13628227 Capsella rubella
Carub.0002s2646 5.0kb upstream 5.0kb upstream 7058 true scaffold_2: 13628228-13635285 Capsella rubella
Carub.0002s2646 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13630286-13635285 Capsella rubella
Carub.0002s2646 5.0kb downstream 5.0kb downstream 7058 true scaffold_2: 13623228-13630285 Capsella rubella
Carub.0002s2646 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13623228-13628227 Capsella rubella
Carub.0002s2646 10.0kb upstream 10.0kb upstream 12058 true scaffold_2: 13628228-13640285 Capsella rubella
Carub.0002s2646 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13630286-13640285 Capsella rubella
Carub.0002s2646 10.0kb downstream 10.0kb downstream 12058 true scaffold_2: 13618228-13630285 Capsella rubella
Carub.0002s2646 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13618228-13628227 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378190 5261 Brassicaceae View MSA
123832696 5264 Brassicales-Malvales View MSA
124343530 5266 SBM View MSA
124251177 5268 Malvidae View MSA
124063722 5270 Rosid View MSA
123740377 5271 Pentapetalae View MSA
122788631 5272 Eudicot View MSA
122045964 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain