Gene : Carub.0008s0042 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  42
Name:  ? Carub.0008s0042 Secondary Identifier:  ? PAC:39252258
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0042 0.5kb upstream 0.5kb upstream 1934 true scaffold_8: 141667-143600 Capsella rubella
Carub.0008s0042 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 141667-142166 Capsella rubella
Carub.0008s0042 0.5kb downstream 0.5kb downstream 1934 true scaffold_8: 142167-144100 Capsella rubella
Carub.0008s0042 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 143601-144100 Capsella rubella
Carub.0008s0042 1.0kb upstream 1.0kb upstream 2434 true scaffold_8: 141167-143600 Capsella rubella
Carub.0008s0042 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 141167-142166 Capsella rubella
Carub.0008s0042 1.0kb downstream 1.0kb downstream 2434 true scaffold_8: 142167-144600 Capsella rubella
Carub.0008s0042 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 143601-144600 Capsella rubella
Carub.0008s0042 2.0kb upstream 2.0kb upstream 3434 true scaffold_8: 140167-143600 Capsella rubella
Carub.0008s0042 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 140167-142166 Capsella rubella
Carub.0008s0042 2.0kb downstream 2.0kb downstream 3434 true scaffold_8: 142167-145600 Capsella rubella
Carub.0008s0042 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 143601-145600 Capsella rubella
Carub.0008s0042 5.0kb upstream 5.0kb upstream 6434 true scaffold_8: 137167-143600 Capsella rubella
Carub.0008s0042 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 137167-142166 Capsella rubella
Carub.0008s0042 5.0kb downstream 5.0kb downstream 6434 true scaffold_8: 142167-148600 Capsella rubella
Carub.0008s0042 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 143601-148600 Capsella rubella
Carub.0008s0042 10.0kb upstream 10.0kb upstream 11434 true scaffold_8: 132167-143600 Capsella rubella
Carub.0008s0042 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 132167-142166 Capsella rubella
Carub.0008s0042 10.0kb downstream 10.0kb downstream 11434 true scaffold_8: 142167-153600 Capsella rubella
Carub.0008s0042 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 143601-153600 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363010 5261 Brassicaceae View MSA
123828418 5264 Brassicales-Malvales View MSA
124345296 5266 SBM View MSA
124243295 5268 Malvidae View MSA
124066946 5270 Rosid View MSA
123748514 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain