Gene : Carub.0006s0899 C. rubella v1.1
Defline:  (1 of 2) PTHR32467//PTHR32467:SF33 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6-RELATED Genomic Order:  899
Name:  ? Carub.0006s0899 Secondary Identifier:  ? PAC:39249390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0899 0.5kb upstream 0.5kb upstream 5562 true scaffold_6: 3258799-3264360 Capsella rubella
Carub.0006s0899 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3258799-3259298 Capsella rubella
Carub.0006s0899 0.5kb downstream 0.5kb downstream 5562 true scaffold_6: 3259299-3264860 Capsella rubella
Carub.0006s0899 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3264361-3264860 Capsella rubella
Carub.0006s0899 1.0kb upstream 1.0kb upstream 6062 true scaffold_6: 3258299-3264360 Capsella rubella
Carub.0006s0899 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3258299-3259298 Capsella rubella
Carub.0006s0899 1.0kb downstream 1.0kb downstream 6062 true scaffold_6: 3259299-3265360 Capsella rubella
Carub.0006s0899 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3264361-3265360 Capsella rubella
Carub.0006s0899 2.0kb upstream 2.0kb upstream 7062 true scaffold_6: 3257299-3264360 Capsella rubella
Carub.0006s0899 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3257299-3259298 Capsella rubella
Carub.0006s0899 2.0kb downstream 2.0kb downstream 7062 true scaffold_6: 3259299-3266360 Capsella rubella
Carub.0006s0899 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3264361-3266360 Capsella rubella
Carub.0006s0899 5.0kb upstream 5.0kb upstream 10062 true scaffold_6: 3254299-3264360 Capsella rubella
Carub.0006s0899 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3254299-3259298 Capsella rubella
Carub.0006s0899 5.0kb downstream 5.0kb downstream 10062 true scaffold_6: 3259299-3269360 Capsella rubella
Carub.0006s0899 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3264361-3269360 Capsella rubella
Carub.0006s0899 10.0kb upstream 10.0kb upstream 15062 true scaffold_6: 3249299-3264360 Capsella rubella
Carub.0006s0899 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3249299-3259298 Capsella rubella
Carub.0006s0899 10.0kb downstream 10.0kb downstream 15062 true scaffold_6: 3259299-3274360 Capsella rubella
Carub.0006s0899 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3264361-3274360 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122374125 5261 Brassicaceae View MSA
123840758 5264 Brassicales-Malvales View MSA
124340736 5266 SBM View MSA
124242841 5268 Malvidae View MSA
124061008 5270 Rosid View MSA
123736704 5271 Pentapetalae View MSA
122790985 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain