Gene : Carub.0008s0050 C. rubella v1.1
Defline:  (1 of 1) PTHR13994//PTHR13994:SF9 - NUDIX HYDROLASE RELATED // NUDIX HYDROLASE 8 Genomic Order:  50
Name:  ? Carub.0008s0050 Secondary Identifier:  ? PAC:39252554
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5381 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0050 0.5kb upstream 0.5kb upstream 2408 true scaffold_8: 167638-170045 Capsella rubella
Carub.0008s0050 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 169546-170045 Capsella rubella
Carub.0008s0050 0.5kb downstream 0.5kb downstream 2408 true scaffold_8: 167138-169545 Capsella rubella
Carub.0008s0050 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 167138-167637 Capsella rubella
Carub.0008s0050 1.0kb upstream 1.0kb upstream 2908 true scaffold_8: 167638-170545 Capsella rubella
Carub.0008s0050 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 169546-170545 Capsella rubella
Carub.0008s0050 1.0kb downstream 1.0kb downstream 2908 true scaffold_8: 166638-169545 Capsella rubella
Carub.0008s0050 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 166638-167637 Capsella rubella
Carub.0008s0050 2.0kb upstream 2.0kb upstream 3908 true scaffold_8: 167638-171545 Capsella rubella
Carub.0008s0050 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 169546-171545 Capsella rubella
Carub.0008s0050 2.0kb downstream 2.0kb downstream 3908 true scaffold_8: 165638-169545 Capsella rubella
Carub.0008s0050 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 165638-167637 Capsella rubella
Carub.0008s0050 5.0kb upstream 5.0kb upstream 6908 true scaffold_8: 167638-174545 Capsella rubella
Carub.0008s0050 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 169546-174545 Capsella rubella
Carub.0008s0050 5.0kb downstream 5.0kb downstream 6908 true scaffold_8: 162638-169545 Capsella rubella
Carub.0008s0050 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 162638-167637 Capsella rubella
Carub.0008s0050 10.0kb upstream 10.0kb upstream 11908 true scaffold_8: 167638-179545 Capsella rubella
Carub.0008s0050 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 169546-179545 Capsella rubella
Carub.0008s0050 10.0kb downstream 10.0kb downstream 11908 true scaffold_8: 157638-169545 Capsella rubella
Carub.0008s0050 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 157638-167637 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369206 5261 Brassicaceae View MSA
123828958 5264 Brassicales-Malvales View MSA
124337528 5266 SBM View MSA
124238043 5268 Malvidae View MSA
124050440 5270 Rosid View MSA
123741366 5271 Pentapetalae View MSA
122785927 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain