Gene : Carub.0002s2493 C. rubella v1.1
Defline:  (1 of 2) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  2493
Name:  ? Carub.0002s2493 Secondary Identifier:  ? PAC:39245610
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ANAEROFRUCAT-PWY Capsella rubella pathologic  
Crubella ANAGLYCOLYSIS-PWY Capsella rubella pathologic  
Crubella PWY66-399 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2493 0.5kb upstream 0.5kb upstream 3211 true scaffold_2: 13016917-13020127 Capsella rubella
Carub.0002s2493 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13016917-13017416 Capsella rubella
Carub.0002s2493 0.5kb downstream 0.5kb downstream 3211 true scaffold_2: 13017417-13020627 Capsella rubella
Carub.0002s2493 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13020128-13020627 Capsella rubella
Carub.0002s2493 1.0kb upstream 1.0kb upstream 3711 true scaffold_2: 13016417-13020127 Capsella rubella
Carub.0002s2493 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13016417-13017416 Capsella rubella
Carub.0002s2493 1.0kb downstream 1.0kb downstream 3711 true scaffold_2: 13017417-13021127 Capsella rubella
Carub.0002s2493 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13020128-13021127 Capsella rubella
Carub.0002s2493 2.0kb upstream 2.0kb upstream 4711 true scaffold_2: 13015417-13020127 Capsella rubella
Carub.0002s2493 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13015417-13017416 Capsella rubella
Carub.0002s2493 2.0kb downstream 2.0kb downstream 4711 true scaffold_2: 13017417-13022127 Capsella rubella
Carub.0002s2493 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13020128-13022127 Capsella rubella
Carub.0002s2493 5.0kb upstream 5.0kb upstream 7711 true scaffold_2: 13012417-13020127 Capsella rubella
Carub.0002s2493 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13012417-13017416 Capsella rubella
Carub.0002s2493 5.0kb downstream 5.0kb downstream 7711 true scaffold_2: 13017417-13025127 Capsella rubella
Carub.0002s2493 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13020128-13025127 Capsella rubella
Carub.0002s2493 10.0kb upstream 10.0kb upstream 12711 true scaffold_2: 13007417-13020127 Capsella rubella
Carub.0002s2493 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13007417-13017416 Capsella rubella
Carub.0002s2493 10.0kb downstream 10.0kb downstream 12711 true scaffold_2: 13017417-13030127 Capsella rubella
Carub.0002s2493 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13020128-13030127 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373672 5261 Brassicaceae View MSA
123800597 5264 Brassicales-Malvales View MSA
124297995 5266 SBM View MSA
124251254 5268 Malvidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain