Gene : Carub.0002s2544 C. rubella v1.1
Defline:  (1 of 1) PTHR20275:SF2 - NADH KINASE Genomic Order:  2544
Name:  ? Carub.0002s2544 Secondary Identifier:  ? PAC:39243893
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5083 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2544 0.5kb upstream 0.5kb upstream 2669 true scaffold_2: 13239843-13242511 Capsella rubella
Carub.0002s2544 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13239843-13240342 Capsella rubella
Carub.0002s2544 0.5kb downstream 0.5kb downstream 2669 true scaffold_2: 13240343-13243011 Capsella rubella
Carub.0002s2544 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13242512-13243011 Capsella rubella
Carub.0002s2544 1.0kb upstream 1.0kb upstream 3169 true scaffold_2: 13239343-13242511 Capsella rubella
Carub.0002s2544 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13239343-13240342 Capsella rubella
Carub.0002s2544 1.0kb downstream 1.0kb downstream 3169 true scaffold_2: 13240343-13243511 Capsella rubella
Carub.0002s2544 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13242512-13243511 Capsella rubella
Carub.0002s2544 2.0kb upstream 2.0kb upstream 4169 true scaffold_2: 13238343-13242511 Capsella rubella
Carub.0002s2544 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13238343-13240342 Capsella rubella
Carub.0002s2544 2.0kb downstream 2.0kb downstream 4169 true scaffold_2: 13240343-13244511 Capsella rubella
Carub.0002s2544 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13242512-13244511 Capsella rubella
Carub.0002s2544 5.0kb upstream 5.0kb upstream 7169 true scaffold_2: 13235343-13242511 Capsella rubella
Carub.0002s2544 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13235343-13240342 Capsella rubella
Carub.0002s2544 5.0kb downstream 5.0kb downstream 7169 true scaffold_2: 13240343-13247511 Capsella rubella
Carub.0002s2544 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13242512-13247511 Capsella rubella
Carub.0002s2544 10.0kb upstream 10.0kb upstream 12169 true scaffold_2: 13230343-13242511 Capsella rubella
Carub.0002s2544 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13230343-13240342 Capsella rubella
Carub.0002s2544 10.0kb downstream 10.0kb downstream 12169 true scaffold_2: 13240343-13252511 Capsella rubella
Carub.0002s2544 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13242512-13252511 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377787 5261 Brassicaceae View MSA
123831135 5264 Brassicales-Malvales View MSA
124339693 5266 SBM View MSA
124239844 5268 Malvidae View MSA
124067358 5270 Rosid View MSA
123747292 5271 Pentapetalae View MSA
122792371 5272 Eudicot View MSA
122049268 5273 Angiosperm View MSA
121346179 5274 Embryophyte View MSA
123425212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain