Gene : Carub.0002s2546 C. rubella v1.1
Defline:  (1 of 3) PTHR31618//PTHR31618:SF1 - FAMILY NOT NAMED // MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  2546
Name:  ? Carub.0002s2546 Secondary Identifier:  ? PAC:39243440
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2546 0.5kb upstream 0.5kb upstream 3654 true scaffold_2: 13245529-13249182 Capsella rubella
Carub.0002s2546 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13248683-13249182 Capsella rubella
Carub.0002s2546 0.5kb downstream 0.5kb downstream 3654 true scaffold_2: 13245029-13248682 Capsella rubella
Carub.0002s2546 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13245029-13245528 Capsella rubella
Carub.0002s2546 1.0kb upstream 1.0kb upstream 4154 true scaffold_2: 13245529-13249682 Capsella rubella
Carub.0002s2546 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13248683-13249682 Capsella rubella
Carub.0002s2546 1.0kb downstream 1.0kb downstream 4154 true scaffold_2: 13244529-13248682 Capsella rubella
Carub.0002s2546 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13244529-13245528 Capsella rubella
Carub.0002s2546 2.0kb upstream 2.0kb upstream 5154 true scaffold_2: 13245529-13250682 Capsella rubella
Carub.0002s2546 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13248683-13250682 Capsella rubella
Carub.0002s2546 2.0kb downstream 2.0kb downstream 5154 true scaffold_2: 13243529-13248682 Capsella rubella
Carub.0002s2546 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13243529-13245528 Capsella rubella
Carub.0002s2546 5.0kb upstream 5.0kb upstream 8154 true scaffold_2: 13245529-13253682 Capsella rubella
Carub.0002s2546 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13248683-13253682 Capsella rubella
Carub.0002s2546 5.0kb downstream 5.0kb downstream 8154 true scaffold_2: 13240529-13248682 Capsella rubella
Carub.0002s2546 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13240529-13245528 Capsella rubella
Carub.0002s2546 10.0kb upstream 10.0kb upstream 13154 true scaffold_2: 13245529-13258682 Capsella rubella
Carub.0002s2546 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13248683-13258682 Capsella rubella
Carub.0002s2546 10.0kb downstream 10.0kb downstream 13154 true scaffold_2: 13235529-13248682 Capsella rubella
Carub.0002s2546 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13235529-13245528 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371582 5261 Brassicaceae View MSA
123833519 5264 Brassicales-Malvales View MSA
124350910 5266 SBM View MSA
124253835 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain