Gene : Carub.0002s2463 C. rubella v1.1
Defline:  (1 of 5) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  2463
Name:  ? Carub.0002s2463 Secondary Identifier:  ? PAC:39243882
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2463 0.5kb upstream 0.5kb upstream 4330 true scaffold_2: 12882841-12887170 Capsella rubella
Carub.0002s2463 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12882841-12883340 Capsella rubella
Carub.0002s2463 0.5kb downstream 0.5kb downstream 4330 true scaffold_2: 12883341-12887670 Capsella rubella
Carub.0002s2463 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12887171-12887670 Capsella rubella
Carub.0002s2463 1.0kb upstream 1.0kb upstream 4830 true scaffold_2: 12882341-12887170 Capsella rubella
Carub.0002s2463 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12882341-12883340 Capsella rubella
Carub.0002s2463 1.0kb downstream 1.0kb downstream 4830 true scaffold_2: 12883341-12888170 Capsella rubella
Carub.0002s2463 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12887171-12888170 Capsella rubella
Carub.0002s2463 2.0kb upstream 2.0kb upstream 5830 true scaffold_2: 12881341-12887170 Capsella rubella
Carub.0002s2463 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12881341-12883340 Capsella rubella
Carub.0002s2463 2.0kb downstream 2.0kb downstream 5830 true scaffold_2: 12883341-12889170 Capsella rubella
Carub.0002s2463 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12887171-12889170 Capsella rubella
Carub.0002s2463 5.0kb upstream 5.0kb upstream 8830 true scaffold_2: 12878341-12887170 Capsella rubella
Carub.0002s2463 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12878341-12883340 Capsella rubella
Carub.0002s2463 5.0kb downstream 5.0kb downstream 8830 true scaffold_2: 12883341-12892170 Capsella rubella
Carub.0002s2463 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12887171-12892170 Capsella rubella
Carub.0002s2463 10.0kb upstream 10.0kb upstream 13830 true scaffold_2: 12873341-12887170 Capsella rubella
Carub.0002s2463 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12873341-12883340 Capsella rubella
Carub.0002s2463 10.0kb downstream 10.0kb downstream 13830 true scaffold_2: 12883341-12897170 Capsella rubella
Carub.0002s2463 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12887171-12897170 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368019 5261 Brassicaceae View MSA
123836752 5264 Brassicales-Malvales View MSA
124343464 5266 SBM View MSA
124238939 5268 Malvidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain